Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm27960-201ENSMUST00000183445 184 ntBASIC8.63□□□□□ -1.03
Shank3Q4ACU6 Gm37070-201ENSMUST00000193272 460 ntBASIC8.63□□□□□ -1.03
Shank3Q4ACU6 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC8.63□□□□□ -1.03
Shank3Q4ACU6 Gm38840-201ENSMUST00000204716 843 ntBASIC8.63□□□□□ -1.03
Shank3Q4ACU6 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Shank3Q4ACU6 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Shank3Q4ACU6 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Shank3Q4ACU6 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Shank3Q4ACU6 Gm15732-201ENSMUST00000079794 480 ntBASIC8.63□□□□□ -1.03
Shank3Q4ACU6 Gm24621-201ENSMUST00000082679 140 ntBASIC8.63□□□□□ -1.03
Shank3Q4ACU6 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Shank3Q4ACU6 Tbc1d24-207ENSMUST00000171189 4592 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Cyfip2-201ENSMUST00000093165 6604 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Myom1-203ENSMUST00000179759 5308 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm26422-201ENSMUST00000104276 132 ntBASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm11504-201ENSMUST00000120211 173 ntBASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm14613-201ENSMUST00000122239 752 ntBASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm26346-201ENSMUST00000157525 329 ntBASIC8.62□□□□□ -1.03
Shank3Q4ACU6 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm29234-201ENSMUST00000187452 1262 ntBASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm43383-201ENSMUST00000195981 469 ntBASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm10416-201ENSMUST00000197379 645 ntBASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 AC154834.1-201ENSMUST00000224697 358 ntBASIC8.62□□□□□ -1.03
Shank3Q4ACU6 AC113031.1-201ENSMUST00000227400 432 ntBASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Shank3Q4ACU6 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 AC129308.2-203ENSMUST00000224109 2385 ntBASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 AC154828.1-201ENSMUST00000220696 2810 ntBASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Gm8582-201ENSMUST00000164061 789 ntBASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Gm3351-201ENSMUST00000193454 505 ntBASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Gm37139-201ENSMUST00000192134 4419 ntBASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Gm43254-201ENSMUST00000199187 2491 ntBASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Shank3Q4ACU6 Gm42685-201ENSMUST00000200378 2390 ntBASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms