Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm28047Q3US59 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.43□□□□□ -1.06
Gm28047Q3US59 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Gm28047Q3US59 Gm7416-201ENSMUST00000117448 1487 ntBASIC8.43□□□□□ -1.06
Gm28047Q3US59 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC8.43□□□□□ -1.06
Gm28047Q3US59 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm28047Q3US59 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Gm28047Q3US59 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.43□□□□□ -1.06
Gm28047Q3US59 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Gm28047Q3US59 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.43□□□□□ -1.06
Gm28047Q3US59 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.43□□□□□ -1.06
Gm28047Q3US59 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.43□□□□□ -1.06
Gm28047Q3US59 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Gm28047Q3US59 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm25273-201ENSMUST00000104295 115 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm23323-201ENSMUST00000104471 133 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm12598-201ENSMUST00000117333 830 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm13282-201ENSMUST00000121577 545 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm22275-201ENSMUST00000122470 310 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm29355-201ENSMUST00000188178 697 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm28953-201ENSMUST00000188336 697 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm20788-201ENSMUST00000190538 697 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm37395-201ENSMUST00000194721 697 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm43556-201ENSMUST00000196186 681 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm34583-203ENSMUST00000202586 454 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm44192-201ENSMUST00000204195 556 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm45446-201ENSMUST00000209348 216 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm7151-201ENSMUST00000211511 954 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm19885-201ENSMUST00000212853 343 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm7333-201ENSMUST00000213449 1060 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 AC160635.1-201ENSMUST00000216731 474 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 AC167977.2-201ENSMUST00000225676 682 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 CT009539.1-201ENSMUST00000226465 220 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 AC118639.1-203ENSMUST00000228425 2016 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.42□□□□□ -1.06
Gm28047Q3US59 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Gm28047Q3US59 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Gm28047Q3US59 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Gm28047Q3US59 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Gm28047Q3US59 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.41□□□□□ -1.06
Gm28047Q3US59 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Gm28047Q3US59 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Gm28047Q3US59 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.41□□□□□ -1.06
Gm28047Q3US59 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.41□□□□□ -1.06
Gm28047Q3US59 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Gm28047Q3US59 AC122887.2-201ENSMUST00000219465 1603 ntBASIC8.41□□□□□ -1.06
Gm28047Q3US59 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Gm28047Q3US59 Gm12075-201ENSMUST00000117426 397 ntBASIC8.41□□□□□ -1.06
Gm28047Q3US59 Gm15057-201ENSMUST00000121516 534 ntBASIC8.41□□□□□ -1.06
Gm28047Q3US59 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC8.41□□□□□ -1.06
Gm28047Q3US59 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC8.41□□□□□ -1.06
Gm28047Q3US59 Gm22795-201ENSMUST00000157233 118 ntBASIC8.41□□□□□ -1.06
Gm28047Q3US59 Gm23777-201ENSMUST00000158994 259 ntBASIC8.41□□□□□ -1.06
Gm28047Q3US59 Gm26729-201ENSMUST00000180744 352 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms