Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm7839-201ENSMUST00000210755 673 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm18645-202ENSMUST00000212222 760 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm19137-201ENSMUST00000213790 1164 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 AC157017.2-201ENSMUST00000218354 777 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Fcgr4-201ENSMUST00000078825 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Hnrnpk-205ENSMUST00000176207 2653 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Olfr380-203ENSMUST00000127789 1536 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 AC135669.2-201ENSMUST00000215636 4958 ntBASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm12394-201ENSMUST00000107981 3348 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col8a1Q00780 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col8a1Q00780 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col8a1Q00780 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC6.52□□□□□ -1.37
Col8a1Q00780 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 AC154227.2-201ENSMUST00000228677 2101 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 AC121286.2-201ENSMUST00000218069 2470 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm15574-201ENSMUST00000119937 405 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm24781-201ENSMUST00000157636 117 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm7420-201ENSMUST00000162836 842 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Pea15b-201ENSMUST00000182806 387 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm26968-201ENSMUST00000182894 481 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Mir8120-201ENSMUST00000185035 139 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC6.52□□□□□ -1.37
Col8a1Q00780 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm3544-201ENSMUST00000196129 305 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm5309-201ENSMUST00000197416 677 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm44053-201ENSMUST00000203364 929 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm43926-201ENSMUST00000203978 430 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm44258-201ENSMUST00000204925 301 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.52□□□□□ -1.37
Col8a1Q00780 AC159819.1-201ENSMUST00000213911 328 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.52□□□□□ -1.37
Col8a1Q00780 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm46231-201ENSMUST00000220152 314 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 AC154785.1-201ENSMUST00000223280 572 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col8a1Q00780 AC167192.1-201ENSMUST00000225908 139 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm25135-201ENSMUST00000082648 143 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms