Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Mir8099-2-201ENSMUST00000183568 127 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Mir8099-1-201ENSMUST00000184238 127 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm38203-201ENSMUST00000191815 245 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm44471-201ENSMUST00000197963 100 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Hmgb1P63158 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm45782-201ENSMUST00000212670 366 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.15□□□□□ -1.1
Hmgb1P63158 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.15□□□□□ -1.1
Hmgb1P63158 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb1P63158 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb1P63158 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb1P63158 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb1P63158 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb1P63158 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.11
Hmgb1P63158 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Hmgb1P63158 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Hmgb1P63158 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC8.15□□□□□ -1.11
Hmgb1P63158 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Hmgb1P63158 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Hmgb1P63158 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm42727-201ENSMUST00000202446 2823 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 AC132384.7-201ENSMUST00000220198 1391 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm9506-201ENSMUST00000118516 320 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm12632-201ENSMUST00000121223 495 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm13808-201ENSMUST00000121353 184 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 n-R5s47-201ENSMUST00000122516 119 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm25432-201ENSMUST00000158284 66 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm9274-201ENSMUST00000182505 984 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm7200-201ENSMUST00000188426 1163 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm17965-201ENSMUST00000193904 517 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm44319-201ENSMUST00000196974 93 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Rpl32l-201ENSMUST00000216127 399 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC8.14□□□□□ -1.11
Hmgb1P63158 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Olfr890-201ENSMUST00000079804 945 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Hmgb1P63158 AC131747.2-201ENSMUST00000226121 1895 ntBASIC8.14□□□□□ -1.11
Hmgb1P63158 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Hmgb1P63158 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Hmgb1P63158 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Hmgb1P63158 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Hmgb1P63158 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm6729-201ENSMUST00000165173 1452 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 AC139754.2-201ENSMUST00000218037 1455 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm45322-201ENSMUST00000211642 1361 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Hmgb1P63158 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC8.13□□□□□ -1.11
Hmgb1P63158 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm25164-201ENSMUST00000158908 116 ntBASIC8.13□□□□□ -1.11
Hmgb1P63158 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb1P63158 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms