Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC6.58□□□□□ -1.36
Sox6P40645 Gm22795-201ENSMUST00000157233 118 ntBASIC6.58□□□□□ -1.36
Sox6P40645 Gm23740-201ENSMUST00000157385 100 ntBASIC6.58□□□□□ -1.36
Sox6P40645 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC6.58□□□□□ -1.36
Sox6P40645 Gm5611-201ENSMUST00000164523 852 ntBASIC6.58□□□□□ -1.36
Sox6P40645 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Sox6P40645 Gm3611-201ENSMUST00000173687 877 ntBASIC6.58□□□□□ -1.36
Sox6P40645 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox6P40645 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox6P40645 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox6P40645 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox6P40645 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox6P40645 Gm17965-201ENSMUST00000193904 517 ntBASIC6.58□□□□□ -1.36
Sox6P40645 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC6.58□□□□□ -1.36
Sox6P40645 Gm2505-201ENSMUST00000200413 825 ntBASIC6.58□□□□□ -1.36
Sox6P40645 Gm30708-201ENSMUST00000202183 312 ntBASIC6.58□□□□□ -1.36
Sox6P40645 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC6.58□□□□□ -1.36
Sox6P40645 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox6P40645 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.58□□□□□ -1.36
Sox6P40645 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox6P40645 AC153936.1-201ENSMUST00000219874 395 ntBASIC6.58□□□□□ -1.36
Sox6P40645 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.58□□□□□ -1.36
Sox6P40645 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox6P40645 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Sox6P40645 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Sox6P40645 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
Sox6P40645 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox6P40645 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
Sox6P40645 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox6P40645 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sox6P40645 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox6P40645 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox6P40645 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sox6P40645 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox6P40645 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox6P40645 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Sox6P40645 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sox6P40645 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Sox6P40645 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox6P40645 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC6.57□□□□□ -1.36
Sox6P40645 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Sox6P40645 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Gm25614-201ENSMUST00000104013 133 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm22470-201ENSMUST00000104117 130 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.57□□□□□ -1.36
Sox6P40645 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Gm12306-201ENSMUST00000117256 171 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm11880-201ENSMUST00000117612 399 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm14248-201ENSMUST00000117790 544 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.57□□□□□ -1.36
Sox6P40645 Gm15616-201ENSMUST00000118662 375 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm11198-201ENSMUST00000119771 974 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Sox6P40645 Gm14796-201ENSMUST00000121216 959 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm13282-201ENSMUST00000121577 545 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC6.57□□□□□ -1.36
Sox6P40645 Gm24782-201ENSMUST00000157641 132 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sox6P40645 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sox6P40645 Gm7502-201ENSMUST00000169235 733 ntBASIC6.57□□□□□ -1.36
Sox6P40645 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm28894-201ENSMUST00000185214 615 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox6P40645 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Gm37369-201ENSMUST00000194179 615 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm43725-201ENSMUST00000200122 369 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm43108-201ENSMUST00000200525 293 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Gm44380-201ENSMUST00000203125 293 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox6P40645 AC151904.2-201ENSMUST00000218683 1177 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Gm5080-201ENSMUST00000220341 743 ntBASIC6.57□□□□□ -1.36
Sox6P40645 CT025639.2-201ENSMUST00000224440 1220 ntBASIC6.57□□□□□ -1.36
Sox6P40645 CT009539.1-201ENSMUST00000226465 220 ntBASIC6.57□□□□□ -1.36
Sox6P40645 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.57□□□□□ -1.36
Sox6P40645 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Sox6P40645 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Sox6P40645 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Sox6P40645 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox6P40645 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox6P40645 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
Sox6P40645 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sox6P40645 Gm38262-201ENSMUST00000194760 1382 ntBASIC6.57□□□□□ -1.36
Sox6P40645 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms