Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd1P40201 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd1P40201 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC10.39□□□□□ -0.75
Chd1P40201 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd1P40201 Gm25917-201ENSMUST00000104267 130 ntBASIC10.39□□□□□ -0.75
Chd1P40201 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd1P40201 Gm23343-201ENSMUST00000158964 143 ntBASIC10.39□□□□□ -0.75
Chd1P40201 Gm9064-201ENSMUST00000163579 566 ntBASIC10.39□□□□□ -0.75
Chd1P40201 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC10.39□□□□□ -0.75
Chd1P40201 Gm9597-201ENSMUST00000171913 602 ntBASIC10.39□□□□□ -0.75
Chd1P40201 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC10.39□□□□□ -0.75
Chd1P40201 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC10.39□□□□□ -0.75
Chd1P40201 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Chd1P40201 CT009711.4-201ENSMUST00000225685 198 ntBASIC10.39□□□□□ -0.75
Chd1P40201 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Chd1P40201 Gm7676-201ENSMUST00000084055 319 ntBASIC10.39□□□□□ -0.75
Chd1P40201 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC10.39□□□□□ -0.75
Chd1P40201 AC122356.1-202ENSMUST00000227328 2758 ntBASIC10.39□□□□□ -0.75
Chd1P40201 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Chd1P40201 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd1P40201 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd1P40201 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd1P40201 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.39□□□□□ -0.75
Chd1P40201 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Chd1P40201 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd1P40201 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC10.39□□□□□ -0.75
Chd1P40201 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC10.39□□□□□ -0.75
Chd1P40201 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Chd1P40201 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Chd1P40201 n-R5s72-201ENSMUST00000104518 119 ntBASIC10.38□□□□□ -0.75
Chd1P40201 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Chd1P40201 Gm14512-201ENSMUST00000117924 230 ntBASIC10.38□□□□□ -0.75
Chd1P40201 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC10.38□□□□□ -0.75
Chd1P40201 Gm23662-201ENSMUST00000158046 111 ntBASIC10.38□□□□□ -0.75
Chd1P40201 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC10.38□□□□□ -0.75
Chd1P40201 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Chd1P40201 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC10.38□□□□□ -0.75
Chd1P40201 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 AC140393.3-201ENSMUST00000228396 1352 ntBASIC10.38□□□□□ -0.75
Chd1P40201 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Gm42608-201ENSMUST00000197563 2018 ntBASIC10.38□□□□□ -0.75
Chd1P40201 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC10.38□□□□□ -0.75
Chd1P40201 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC10.38□□□□□ -0.75
Chd1P40201 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Chd1P40201 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Chd1P40201 Gm6181-201ENSMUST00000117187 264 ntBASIC10.38□□□□□ -0.75
Chd1P40201 Gm12402-201ENSMUST00000120536 334 ntBASIC10.38□□□□□ -0.75
Chd1P40201 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Scarna6-201ENSMUST00000158656 265 ntBASIC10.38□□□□□ -0.75
Chd1P40201 Gm22261-201ENSMUST00000158691 324 ntBASIC10.38□□□□□ -0.75
Chd1P40201 Gm37265-201ENSMUST00000191698 885 ntBASIC10.38□□□□□ -0.75
Chd1P40201 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC10.38□□□□□ -0.75
Chd1P40201 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC10.38□□□□□ -0.75
Chd1P40201 Gm31166-201ENSMUST00000209326 288 ntBASIC10.38□□□□□ -0.75
Chd1P40201 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC10.38□□□□□ -0.75
Chd1P40201 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Chd1P40201 Gm11853-201ENSMUST00000119687 1384 ntBASIC10.38□□□□□ -0.75
Chd1P40201 Gm18878-201ENSMUST00000223071 1443 ntBASIC10.38□□□□□ -0.75
Chd1P40201 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Amy2b-201ENSMUST00000120184 1577 ntBASIC10.38□□□□□ -0.75
Chd1P40201 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Chd1P40201 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd1P40201 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd1P40201 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd1P40201 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Chd1P40201 Gm38300-201ENSMUST00000194245 1870 ntBASIC10.37□□□□□ -0.75
Chd1P40201 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd1P40201 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd1P40201 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Chd1P40201 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd1P40201 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Chd1P40201 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd1P40201 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd1P40201 Mrps5-201ENSMUST00000028852 4481 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd1P40201 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd1P40201 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd1P40201 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd1P40201 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC10.37□□□□□ -0.75
Chd1P40201 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Chd1P40201 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC10.37□□□□□ -0.75
Chd1P40201 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Chd1P40201 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Chd1P40201 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Chd1P40201 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Chd1P40201 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Chd1P40201 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd1P40201 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms