Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm15500-201ENSMUST00000071523 894 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Lire1P11260 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Lire1P11260 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Lire1P11260 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Lire1P11260 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Lire1P11260 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Lire1P11260 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Lire1P11260 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Lire1P11260 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.96□□□□□ -1.29
Lire1P11260 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC6.96□□□□□ -1.29
Lire1P11260 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC6.96□□□□□ -1.29
Lire1P11260 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.96□□□□□ -1.29
Lire1P11260 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Lire1P11260 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.96□□□□□ -1.29
Lire1P11260 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.29
Lire1P11260 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.29
Lire1P11260 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Lire1P11260 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.96□□□□□ -1.29
Lire1P11260 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Lire1P11260 Gm45360-201ENSMUST00000210698 1405 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Gm11970-201ENSMUST00000116105 320 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC6.96□□□□□ -1.3
Lire1P11260 Gm14563-201ENSMUST00000120571 354 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC6.96□□□□□ -1.3
Lire1P11260 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Lire1P11260 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Lire1P11260 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Gm24923-201ENSMUST00000178201 88 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Gm5835-201ENSMUST00000185806 1270 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Gm6799-201ENSMUST00000186919 573 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.96□□□□□ -1.3
Lire1P11260 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Lire1P11260 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC6.96□□□□□ -1.3
Lire1P11260 Gm29214-201ENSMUST00000190216 570 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC6.96□□□□□ -1.3
Lire1P11260 Gm6649-201ENSMUST00000199743 1165 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Gm40319-201ENSMUST00000199785 481 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC6.96□□□□□ -1.3
Lire1P11260 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.96□□□□□ -1.3
Lire1P11260 Gm44508-201ENSMUST00000206943 1157 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Gm19092-201ENSMUST00000209036 969 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Gm45319-201ENSMUST00000210220 318 ntBASIC6.96□□□□□ -1.3
Lire1P11260 AC155259.1-201ENSMUST00000214794 477 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Lire1P11260 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC6.96□□□□□ -1.3
Lire1P11260 AC154595.1-201ENSMUST00000225533 1059 ntBASIC6.96□□□□□ -1.3
Lire1P11260 AC161877.2-201ENSMUST00000226248 545 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Lire1P11260 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Lire1P11260 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Lire1P11260 Gm38264-201ENSMUST00000194850 2032 ntBASIC6.96□□□□□ -1.3
Lire1P11260 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.96□□□□□ -1.3
Lire1P11260 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Lire1P11260 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Lire1P11260 Gm7647-201ENSMUST00000200996 1389 ntBASIC6.95□□□□□ -1.3
Lire1P11260 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.95□□□□□ -1.3
Lire1P11260 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Lire1P11260 Gm37326-201ENSMUST00000192828 3071 ntBASIC6.95□□□□□ -1.3
Lire1P11260 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Lire1P11260 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.95□□□□□ -1.3
Lire1P11260 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.95□□□□□ -1.3
Lire1P11260 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Lire1P11260 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Lire1P11260 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.95□□□□□ -1.3
Lire1P11260 AC166341.5-201ENSMUST00000222206 1400 ntBASIC6.95□□□□□ -1.3
Lire1P11260 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Lire1P11260 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Lire1P11260 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.95□□□□□ -1.3
Lire1P11260 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Lire1P11260 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Lire1P11260 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Lire1P11260 Gm38315-201ENSMUST00000194286 2437 ntBASIC6.95□□□□□ -1.3
Lire1P11260 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.95□□□□□ -1.3
Lire1P11260 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Lire1P11260 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Lire1P11260 Gm23485-201ENSMUST00000104181 155 ntBASIC6.95□□□□□ -1.3
Lire1P11260 Gm11649-201ENSMUST00000118214 375 ntBASIC6.95□□□□□ -1.3
Lire1P11260 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC6.95□□□□□ -1.3
Lire1P11260 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms