Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm26416-201ENSMUST00000104280 134 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm25631-201ENSMUST00000104390 130 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm22024-201ENSMUST00000122733 287 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Mir3060-201ENSMUST00000175339 83 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm8357-201ENSMUST00000181115 1011 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm26528-201ENSMUST00000181965 283 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 CT009738.1-201ENSMUST00000219031 809 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm35638-201ENSMUST00000220724 652 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm36758-201ENSMUST00000222594 310 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 AC133598.4-201ENSMUST00000224577 454 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 AC165260.3-201ENSMUST00000225101 665 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 AC154361.1-201ENSMUST00000225694 745 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm24411-201ENSMUST00000083428 131 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm24924-201ENSMUST00000084007 164 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm38697-201ENSMUST00000198061 1746 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Chmp6P0C0A3 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm42462-201ENSMUST00000196543 1363 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm22707-201ENSMUST00000103834 110 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm11864-201ENSMUST00000116179 1220 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm6743-201ENSMUST00000117345 1066 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm8812-201ENSMUST00000118496 412 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm23657-201ENSMUST00000122623 294 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm16357-201ENSMUST00000144091 474 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm25505-201ENSMUST00000157220 246 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm5787-201ENSMUST00000183049 1038 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm29354-201ENSMUST00000187613 696 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm5154-201ENSMUST00000203971 399 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm5305-201ENSMUST00000204010 746 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm44112-201ENSMUST00000204787 372 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 AC121997.2-202ENSMUST00000227158 939 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 CT025630.2-201ENSMUST00000228293 487 ntBASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp6P0C0A3 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm44863-201ENSMUST00000207613 1422 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm42885-201ENSMUST00000200763 4214 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm15538-201ENSMUST00000121410 313 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm14728-201ENSMUST00000122196 492 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm27866-201ENSMUST00000184459 171 ntBASIC7.61□□□□□ -1.19
Chmp6P0C0A3 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.61□□□□□ -1.19
Chmp6P0C0A3 Gm20136-201ENSMUST00000207501 891 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms