Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm16445-201ENSMUST00000120399 714 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm5646-201ENSMUST00000120568 714 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Mettl8-205ENSMUST00000121586 1151 ntTSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm15694-201ENSMUST00000121984 283 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm12223-201ENSMUST00000135468 528 ntTSL 3 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC6.67□□□□□ -1.34
Hoxd3P09027 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm11454-201ENSMUST00000144092 714 ntTSL 3 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Hoxd3P09027 D630023F18Rik-202ENSMUST00000148020 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm26070-201ENSMUST00000157500 137 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm16541-201ENSMUST00000160992 614 ntTSL 3 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm17053-201ENSMUST00000163501 495 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm25735-201ENSMUST00000175164 215 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm21762-201ENSMUST00000177561 456 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Hoxd3P09027 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm15143-201ENSMUST00000178180 714 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm5947-201ENSMUST00000179156 714 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm5645-201ENSMUST00000179597 714 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm6723-201ENSMUST00000180449 441 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm26726-201ENSMUST00000181889 395 ntTSL 3 BASIC6.67□□□□□ -1.34
Hoxd3P09027 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm28478-201ENSMUST00000185802 183 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm2314-201ENSMUST00000200391 586 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm43850-201ENSMUST00000202021 578 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm42903-201ENSMUST00000202607 481 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm44048-201ENSMUST00000204531 361 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm44266-201ENSMUST00000205235 500 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm45100-201ENSMUST00000209153 391 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 AC130829.2-201ENSMUST00000222931 127 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
Hoxd3P09027 CT025603.3-201ENSMUST00000224031 419 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 AC124736.1-201ENSMUST00000226382 419 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 AC139758.2-201ENSMUST00000228380 529 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Olfr543-201ENSMUST00000061482 1130 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm8623-201ENSMUST00000071573 436 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm25410-201ENSMUST00000083758 137 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm25512-201ENSMUST00000083863 107 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm38352-201ENSMUST00000194459 2557 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Ncaph2-201ENSMUST00000036987 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Ncaph2-202ENSMUST00000074552 3299 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Havcr1-203ENSMUST00000109223 1982 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Nr6a1-201ENSMUST00000076275 5941 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Ccser2-209ENSMUST00000183038 1681 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm14258-201ENSMUST00000144607 2031 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm15964-201ENSMUST00000138207 2745 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Cdh8-204ENSMUST00000142129 2711 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Zmynd8-201ENSMUST00000018050 4130 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Adra1a-201ENSMUST00000054661 4137 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Tex28-201ENSMUST00000078060 1420 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Rnf214-209ENSMUST00000161203 3294 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Ctnna3-203ENSMUST00000105441 2907 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm42755-201ENSMUST00000198533 1493 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Agbl4-206ENSMUST00000106592 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm42895-201ENSMUST00000200761 2996 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Olfr549-202ENSMUST00000217478 1891 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Wdr48-205ENSMUST00000215307 3776 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 AC161117.1-201ENSMUST00000221366 1529 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Lrrc32-201ENSMUST00000165205 3817 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Nol11-202ENSMUST00000106757 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gpr1-201ENSMUST00000050536 1940 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Uhrf1-203ENSMUST00000113038 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 144.1 ms