Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC5.66□□□□□ -1.5
Hmgb3O54879 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm29471-201ENSMUST00000190527 700 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC5.66□□□□□ -1.5
Hmgb3O54879 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm43275-201ENSMUST00000202053 1020 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm18765-201ENSMUST00000203166 660 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm43905-201ENSMUST00000204516 204 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm8168-201ENSMUST00000209631 948 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm45497-201ENSMUST00000211701 740 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC5.66□□□□□ -1.5
Hmgb3O54879 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm19238-201ENSMUST00000221936 1260 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 AC131745.3-201ENSMUST00000223582 554 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm5250-201ENSMUST00000059065 321 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm9894-201ENSMUST00000171257 2904 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hmgb3O54879 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Hmgb3O54879 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Hmgb3O54879 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Hmgb3O54879 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm26469-201ENSMUST00000116765 121 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Mir669e-201ENSMUST00000117003 119 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm13858-201ENSMUST00000118862 671 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm12034-201ENSMUST00000119032 399 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Hmgb3O54879 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm22763-201ENSMUST00000158374 107 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm25266-201ENSMUST00000158521 304 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hmgb3O54879 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hmgb3O54879 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm26612-201ENSMUST00000180785 1055 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm8357-201ENSMUST00000181115 1011 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm8192-201ENSMUST00000182196 958 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm27595-201ENSMUST00000184579 112 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm21181-201ENSMUST00000186249 330 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm29357-201ENSMUST00000186877 698 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm28677-202ENSMUST00000186904 615 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm17970-201ENSMUST00000192199 685 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm38047-201ENSMUST00000193690 1133 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm37339-201ENSMUST00000194142 392 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm7424-201ENSMUST00000206919 902 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm44861-201ENSMUST00000208325 1220 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm9354-201ENSMUST00000209075 468 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Gm36758-201ENSMUST00000222594 310 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 AC238940.2-201ENSMUST00000224202 330 ntBASIC5.65□□□□□ -1.5
Hmgb3O54879 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Hmgb3O54879 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Hmgb3O54879 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Hmgb3O54879 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Hmgb3O54879 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Hmgb3O54879 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Hmgb3O54879 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Hmgb3O54879 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC5.65□□□□□ -1.51
Hmgb3O54879 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Hmgb3O54879 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Hmgb3O54879 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Hmgb3O54879 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Hmgb3O54879 AC131667.1-201ENSMUST00000214665 2175 ntBASIC5.65□□□□□ -1.51
Hmgb3O54879 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hmgb3O54879 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms