Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Syngap1F6SEU4 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Syngap1F6SEU4 Gm44996-201ENSMUST00000208787 2980 ntBASIC8.13□□□□□ -1.11
Syngap1F6SEU4 Gm38386-201ENSMUST00000194293 3421 ntBASIC8.13□□□□□ -1.11
Syngap1F6SEU4 AC154461.6-201ENSMUST00000224815 2630 ntBASIC8.13□□□□□ -1.11
Syngap1F6SEU4 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Syngap1F6SEU4 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Syngap1F6SEU4 Gm13821-201ENSMUST00000202029 3201 ntBASIC8.13□□□□□ -1.11
Syngap1F6SEU4 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Syngap1F6SEU4 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Syngap1F6SEU4 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Syngap1F6SEU4 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Syngap1F6SEU4 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Syngap1F6SEU4 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Syngap1F6SEU4 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm12099-201ENSMUST00000118660 750 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm15484-201ENSMUST00000118871 828 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Mir7084-201ENSMUST00000183876 70 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm37439-201ENSMUST00000193150 856 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm2602-201ENSMUST00000202112 571 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm44683-201ENSMUST00000209088 484 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm45878-201ENSMUST00000211839 241 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm45733-201ENSMUST00000212988 437 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm9110-201ENSMUST00000219035 617 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 AC154646.1-201ENSMUST00000225011 1092 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm10221-201ENSMUST00000088299 309 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gm37891-201ENSMUST00000195585 1326 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Syngap1F6SEU4 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Gm10388-201ENSMUST00000205001 2936 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Gm24824-201ENSMUST00000175097 78 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Gm27960-201ENSMUST00000183445 184 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Gm27210-201ENSMUST00000184263 402 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Gm28745-201ENSMUST00000190069 305 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Gm42734-201ENSMUST00000201656 878 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Gm43124-201ENSMUST00000201878 278 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Gm4083-201ENSMUST00000207158 451 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Gm19195-201ENSMUST00000222018 511 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Olfr683-201ENSMUST00000061284 960 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 n-R5s60-201ENSMUST00000083299 119 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 CT030185.2-201ENSMUST00000222614 1310 ntBASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Syngap1F6SEU4 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms