Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm41-201ENSMUST00000116183 1023 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm6630-201ENSMUST00000119199 454 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm16026-205ENSMUST00000162923 641 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm8696-201ENSMUST00000174777 385 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm20549-201ENSMUST00000174804 429 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm4956-202ENSMUST00000178869 672 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm5787-201ENSMUST00000183049 1038 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm28677-202ENSMUST00000186904 615 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm44111-201ENSMUST00000204649 399 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm18207-201ENSMUST00000205486 526 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm2767-201ENSMUST00000209582 473 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 AC122539.2-201ENSMUST00000220207 404 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 CT009742.1-201ENSMUST00000222507 702 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 AC131745.3-201ENSMUST00000223582 554 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Gm12887B1AVM1 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 AC158537.1-201ENSMUST00000224637 1711 ntBASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm31049-201ENSMUST00000201516 1302 ntBASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm11318-201ENSMUST00000118640 961 ntBASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm22763-201ENSMUST00000158374 107 ntBASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm17217-201ENSMUST00000166613 469 ntBASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm24576-201ENSMUST00000175508 248 ntBASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm26980-201ENSMUST00000183321 395 ntBASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm36928-201ENSMUST00000192466 694 ntBASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm37325-201ENSMUST00000194971 694 ntBASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC5.51□□□□□ -1.53
Gm12887B1AVM1 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms