Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Ube3bQ9ES34 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ube3bQ9ES34 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 AC122426.1-201ENSMUST00000214736 2235 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm6640-201ENSMUST00000120629 1587 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm22660-201ENSMUST00000104193 130 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm13680-201ENSMUST00000119790 793 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm15843-201ENSMUST00000146593 529 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm24647-201ENSMUST00000157112 113 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm22836-201ENSMUST00000158441 61 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm22149-202ENSMUST00000196259 137 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm43350-201ENSMUST00000196382 711 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm4410-201ENSMUST00000199349 686 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm20223-201ENSMUST00000199932 805 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm17997-201ENSMUST00000211801 840 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 AL772397.1-201ENSMUST00000216707 606 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm7392-201ENSMUST00000217815 345 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 AC157571.1-201ENSMUST00000222014 520 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 AC165260.3-201ENSMUST00000225101 665 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 AC119573.1-201ENSMUST00000227960 757 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 AC137902.2-201ENSMUST00000227989 576 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm17199-201ENSMUST00000097296 416 ntBASIC9.39□□□□□ -0.91
Ube3bQ9ES34 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm26902-201ENSMUST00000181307 3100 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm28427-201ENSMUST00000190144 2162 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Gm38072-201ENSMUST00000192127 2162 ntTSL 5 BASIC9.39□□□□□ -0.91
Ube3bQ9ES34 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm22927-201ENSMUST00000104268 131 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm24195-201ENSMUST00000116804 137 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm2003-201ENSMUST00000118537 636 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm1989-201ENSMUST00000126244 636 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm20452-201ENSMUST00000174686 513 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Mir8099-2-201ENSMUST00000183568 127 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Mir8099-1-201ENSMUST00000184238 127 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm21617-201ENSMUST00000188297 691 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm37392-201ENSMUST00000192098 516 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm43287-201ENSMUST00000197747 600 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm18599-201ENSMUST00000206729 1125 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm5338-201ENSMUST00000209530 639 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Gm20948-201ENSMUST00000211091 449 ntBASIC9.38□□□□□ -0.91
Ube3bQ9ES34 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC9.38□□□□□ -0.91
Ube3bQ9ES34 AC163041.1-201ENSMUST00000221984 133 ntBASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms