Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm14531-201ENSMUST00000120845 285 ntBASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gm7746-201ENSMUST00000120966 503 ntBASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gm8539-201ENSMUST00000199822 501 ntBASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gm44760-201ENSMUST00000206375 1173 ntBASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 AC069562.1-201ENSMUST00000224206 434 ntBASIC7.95□□□□□ -1.14
Smc1aQ9CU62 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gm19801-201ENSMUST00000218231 1882 ntBASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm42478-201ENSMUST00000199252 1467 ntBASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm11928-201ENSMUST00000119323 437 ntBASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm13622-201ENSMUST00000120658 433 ntBASIC7.94□□□□□ -1.14
Smc1aQ9CU62 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm7972-201ENSMUST00000208434 1137 ntBASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm45446-201ENSMUST00000209348 216 ntBASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm9604-201ENSMUST00000211175 433 ntBASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 CT010480.3-201ENSMUST00000224712 259 ntBASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm26575-201ENSMUST00000181714 2232 ntBASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm38380-201ENSMUST00000195718 2248 ntBASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smc1aQ9CU62 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.93□□□□□ -1.14
Smc1aQ9CU62 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.93□□□□□ -1.14
Smc1aQ9CU62 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms