Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 AC154646.1-201ENSMUST00000225011 1092 ntBASIC7.39□□□□□ -1.23
Usp11Q99K46 AV026068-229ENSMUST00000225516 595 ntBASIC7.39□□□□□ -1.23
Usp11Q99K46 Gm10247-201ENSMUST00000090395 333 ntBASIC7.39□□□□□ -1.23
Usp11Q99K46 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC7.39□□□□□ -1.23
Usp11Q99K46 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.39□□□□□ -1.23
Usp11Q99K46 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.39□□□□□ -1.23
Usp11Q99K46 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Usp11Q99K46 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.39□□□□□ -1.23
Usp11Q99K46 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Usp11Q99K46 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Usp11Q99K46 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Usp11Q99K46 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Usp11Q99K46 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Usp11Q99K46 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Usp11Q99K46 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Usp11Q99K46 CT010470.1-201ENSMUST00000225364 1876 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC7.38□□□□□ -1.23
Usp11Q99K46 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm15074-201ENSMUST00000117603 936 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm13130-201ENSMUST00000119195 1166 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm5970-201ENSMUST00000131638 1216 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm26959-201ENSMUST00000182376 978 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm27972-201ENSMUST00000184720 137 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 Trbv9-201ENSMUST00000194494 290 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm8920-201ENSMUST00000196153 924 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm6581-201ENSMUST00000214545 260 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 AC122305.2-201ENSMUST00000215148 834 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 CT030166.4-201ENSMUST00000220640 404 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 AC116502.1-201ENSMUST00000220989 291 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm7986-201ENSMUST00000221336 551 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm5084-202ENSMUST00000224064 3609 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Usp11Q99K46 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Usp11Q99K46 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp11Q99K46 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.38□□□□□ -1.23
Usp11Q99K46 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC7.37□□□□□ -1.23
Usp11Q99K46 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Usp11Q99K46 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Usp11Q99K46 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.37□□□□□ -1.23
Usp11Q99K46 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Usp11Q99K46 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Usp11Q99K46 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Usp11Q99K46 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Usp11Q99K46 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Usp11Q99K46 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Usp11Q99K46 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 Gm25546-201ENSMUST00000103977 132 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Usp11Q99K46 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Usp11Q99K46 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC7.37□□□□□ -1.23
Usp11Q99K46 Gm16044-201ENSMUST00000118475 450 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 Gm12754-201ENSMUST00000121908 454 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 Gm4887-201ENSMUST00000122230 1053 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Usp11Q99K46 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.37□□□□□ -1.23
Usp11Q99K46 Gm5272-201ENSMUST00000182730 982 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Usp11Q99K46 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 Gm37295-201ENSMUST00000192186 109 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 Gm36928-201ENSMUST00000192466 694 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 Gm38337-201ENSMUST00000193986 599 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 Gm37325-201ENSMUST00000194971 694 ntBASIC7.37□□□□□ -1.23
Usp11Q99K46 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms