Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Gm2619-202ENSMUST00000166777 651 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Mir6908-201ENSMUST00000184056 63 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Mir8120-201ENSMUST00000185035 139 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Ighv1-29-201ENSMUST00000194116 342 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Gm18943-201ENSMUST00000207357 1216 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Gm19217-201ENSMUST00000218238 328 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 AC151901.1-201ENSMUST00000218274 180 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 n-R5s29-201ENSMUST00000082836 119 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Gm43873-201ENSMUST00000204505 3938 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 AC124421.1-201ENSMUST00000219114 4154 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm13545-201ENSMUST00000119044 482 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm8421-201ENSMUST00000119439 305 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm11850-201ENSMUST00000119679 479 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm13486-201ENSMUST00000119910 282 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm15316-201ENSMUST00000121082 421 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm12321-201ENSMUST00000121485 804 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm37017-201ENSMUST00000195266 747 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm42883-201ENSMUST00000202594 222 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 AC151904.5-201ENSMUST00000218975 549 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm24924-201ENSMUST00000084007 164 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nup88Q8CEC0 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm10855-201ENSMUST00000100426 2541 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms