Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Atg4aQ8C9S8 CT030185.1-201ENSMUST00000222940 2289 ntBASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 AC126549.1-201ENSMUST00000225044 3687 ntBASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm15681-201ENSMUST00000137501 2704 ntBASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm14865-201ENSMUST00000117523 494 ntBASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm11889-201ENSMUST00000118402 1079 ntBASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm14728-201ENSMUST00000122196 492 ntBASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm37270-201ENSMUST00000194277 330 ntBASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm3678-201ENSMUST00000218888 492 ntBASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 AC163684.1-201ENSMUST00000223766 927 ntBASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 AC133598.4-201ENSMUST00000224577 454 ntBASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm24451-201ENSMUST00000083353 133 ntBASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm6327-201ENSMUST00000171185 1335 ntBASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Atg4aQ8C9S8 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Gm44661-201ENSMUST00000208830 3503 ntBASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Gm14729-201ENSMUST00000118373 689 ntBASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Gm6489-201ENSMUST00000178167 696 ntBASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Gm42782-201ENSMUST00000197286 522 ntBASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Atg4aQ8C9S8 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Gm43221-201ENSMUST00000197612 2071 ntBASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms