Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm5514-201ENSMUST00000060477 306 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 AC159195.2-201ENSMUST00000223670 3757 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm11553-201ENSMUST00000120682 240 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm18752-201ENSMUST00000192876 608 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm5711-201ENSMUST00000197896 421 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm43377-201ENSMUST00000201640 455 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 AC163684.1-201ENSMUST00000223766 927 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 Gpr87-201ENSMUST00000056898 1080 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 n-R5s217-201ENSMUST00000083341 116 ntBASIC9.88□□□□□ -0.83
Usp47Q8BY87 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Usp47Q8BY87 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm14762-201ENSMUST00000105109 1771 ntBASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Grik1-210ENSMUST00000228034 2708 ntBASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm15311-201ENSMUST00000119682 282 ntBASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm15305-201ENSMUST00000120354 288 ntBASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm9167-201ENSMUST00000182469 962 ntBASIC9.87□□□□□ -0.83
Usp47Q8BY87 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm7867-201ENSMUST00000189856 546 ntBASIC9.87□□□□□ -0.83
Usp47Q8BY87 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm8667-201ENSMUST00000211112 449 ntBASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm45739-201ENSMUST00000213094 388 ntBASIC9.87□□□□□ -0.83
Usp47Q8BY87 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC9.87□□□□□ -0.83
Usp47Q8BY87 CT009495.1-201ENSMUST00000224221 862 ntBASIC9.87□□□□□ -0.83
Usp47Q8BY87 AC151730.1-201ENSMUST00000226106 448 ntBASIC9.87□□□□□ -0.83
Usp47Q8BY87 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gm44745-201ENSMUST00000206563 2723 ntBASIC9.87□□□□□ -0.83
Usp47Q8BY87 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Usp47Q8BY87 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Gm37510-201ENSMUST00000194151 4762 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp47Q8BY87 AC162301.1-201ENSMUST00000228785 1542 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp47Q8BY87 AC163660.4-201ENSMUST00000224983 2171 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 171 ms