Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm16073-201ENSMUST00000116032 517 ntBASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm11553-201ENSMUST00000120682 240 ntBASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm7494-201ENSMUST00000121248 441 ntBASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm25109-201ENSMUST00000122474 114 ntBASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm25178-201ENSMUST00000122633 325 ntBASIC9.71□□□□□ -0.86
Usp40Q8BWR4 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm4202-201ENSMUST00000169025 733 ntBASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm25574-201ENSMUST00000175245 249 ntBASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm28766-201ENSMUST00000191086 234 ntBASIC9.71□□□□□ -0.86
Usp40Q8BWR4 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm18040-201ENSMUST00000217922 827 ntBASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC9.71□□□□□ -0.86
Usp40Q8BWR4 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Mir674-201ENSMUST00000102421 100 ntBASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Gm5601-201ENSMUST00000118909 972 ntBASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Gm14741-201ENSMUST00000120777 1009 ntBASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Gm24176-201ENSMUST00000158928 121 ntBASIC9.7□□□□□ -0.86
Usp40Q8BWR4 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Gm42580-201ENSMUST00000197223 753 ntBASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Gm8168-201ENSMUST00000209631 948 ntBASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 CT025552.1-201ENSMUST00000224561 521 ntBASIC9.7□□□□□ -0.86
Usp40Q8BWR4 AC159267.1-201ENSMUST00000226702 678 ntBASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Gm10744-201ENSMUST00000220184 2706 ntBASIC9.7□□□□□ -0.86
Usp40Q8BWR4 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Usp40Q8BWR4 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Gm26474-201ENSMUST00000116762 122 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Gm11501-201ENSMUST00000118039 581 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Gm14202-201ENSMUST00000120121 311 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Gm13237-201ENSMUST00000122151 635 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Gm23756-201ENSMUST00000157582 114 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Gm24812-201ENSMUST00000175315 284 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Gm44607-201ENSMUST00000205611 1090 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 AC123832.1-201ENSMUST00000214120 2371 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 AC124680.1-201ENSMUST00000223923 1585 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 CT009711.4-201ENSMUST00000225685 198 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 AC159301.1-202ENSMUST00000225860 2133 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 AC138765.3-201ENSMUST00000227981 423 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Gm43618-201ENSMUST00000197392 3451 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Gm37534-201ENSMUST00000194483 5222 ntBASIC9.69□□□□□ -0.86
Usp40Q8BWR4 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Usp40Q8BWR4 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms