Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC121997.2-202ENSMUST00000227158 939 ntBASIC7.43□□□□□ -1.22
Ccdc40Q8BI79 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ccdc40Q8BI79 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc40Q8BI79 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.43□□□□□ -1.22
Ccdc40Q8BI79 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.43□□□□□ -1.22
Ccdc40Q8BI79 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
Ccdc40Q8BI79 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.43□□□□□ -1.22
Ccdc40Q8BI79 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc40Q8BI79 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc40Q8BI79 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC7.43□□□□□ -1.22
Ccdc40Q8BI79 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc40Q8BI79 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Ccdc40Q8BI79 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc40Q8BI79 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc40Q8BI79 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Cmah-208ENSMUST00000224819 9482 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm22439-201ENSMUST00000104048 132 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm15000-201ENSMUST00000118275 1243 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm15644-201ENSMUST00000121764 387 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm13776-201ENSMUST00000122236 1261 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm22024-201ENSMUST00000122733 287 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm5970-201ENSMUST00000131638 1216 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm22882-201ENSMUST00000157749 124 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm7707-201ENSMUST00000165950 1156 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm7393-201ENSMUST00000172650 739 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm19815-201ENSMUST00000175818 335 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm25947-201ENSMUST00000180343 110 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm6610-201ENSMUST00000186324 358 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm18349-201ENSMUST00000187440 904 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm38337-201ENSMUST00000193986 599 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm18484-201ENSMUST00000204389 991 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc40Q8BI79 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm13038-201ENSMUST00000119886 459 ntBASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm11796-201ENSMUST00000120208 972 ntBASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm14787-201ENSMUST00000121236 388 ntBASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm25178-201ENSMUST00000122633 325 ntBASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm10086-201ENSMUST00000136334 354 ntBASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm22206-201ENSMUST00000158612 116 ntBASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm28416-201ENSMUST00000188334 292 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms