Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm43425-201ENSMUST00000201793 3291 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 AC124581.3-201ENSMUST00000224270 1624 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Mir669e-201ENSMUST00000117003 119 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm12365-201ENSMUST00000117931 568 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm12593-201ENSMUST00000120981 743 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm13282-201ENSMUST00000121577 545 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm15730-201ENSMUST00000121828 415 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm14048-201ENSMUST00000121864 1268 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Mir1962-201ENSMUST00000157516 121 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm11107-201ENSMUST00000165414 505 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm17097-201ENSMUST00000166414 714 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Mir8099-2-201ENSMUST00000183568 127 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Mir8099-1-201ENSMUST00000184238 127 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm43725-201ENSMUST00000200122 369 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm43694-201ENSMUST00000200773 1119 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm30708-201ENSMUST00000202183 312 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm42887-201ENSMUST00000202469 1119 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm45246-201ENSMUST00000210820 367 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 AC140208.1-201ENSMUST00000226609 285 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Mir24-2-201ENSMUST00000083607 107 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Gm15189-201ENSMUST00000121164 1966 ntBASIC7.06□□□□□ -1.28
Rnf38Q8BI21 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm5754-201ENSMUST00000118774 892 ntBASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm16056-201ENSMUST00000119293 135 ntBASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm12727-201ENSMUST00000119885 359 ntBASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Mir3471-2-201ENSMUST00000174896 102 ntBASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm24576-201ENSMUST00000175508 248 ntBASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm15251-201ENSMUST00000177947 883 ntBASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm8529-201ENSMUST00000183298 745 ntBASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC7.05□□□□□ -1.28
Rnf38Q8BI21 Gm28335-201ENSMUST00000186204 696 ntBASIC7.05□□□□□ -1.28
Rnf38Q8BI21 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms