Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 AV026068-229ENSMUST00000225516 595 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 AC134869.2-201ENSMUST00000225788 421 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ClpbQ60649 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ClpbQ60649 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Gm43168-201ENSMUST00000201039 1612 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.85□□□□□ -1.31
ClpbQ60649 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
ClpbQ60649 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.85□□□□□ -1.31
ClpbQ60649 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.85□□□□□ -1.31
ClpbQ60649 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC6.85□□□□□ -1.31
ClpbQ60649 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
ClpbQ60649 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
ClpbQ60649 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
ClpbQ60649 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.84□□□□□ -1.31
ClpbQ60649 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
ClpbQ60649 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
ClpbQ60649 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
ClpbQ60649 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
ClpbQ60649 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
ClpbQ60649 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Gm17170-201ENSMUST00000112785 316 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Gm11726-201ENSMUST00000121028 424 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm12754-201ENSMUST00000121908 454 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.84□□□□□ -1.31
ClpbQ60649 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.84□□□□□ -1.31
ClpbQ60649 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Gm15275-201ENSMUST00000154752 347 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm16027-201ENSMUST00000161618 758 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm19840-201ENSMUST00000169624 882 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.84□□□□□ -1.31
ClpbQ60649 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Gm27018-201ENSMUST00000181136 225 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm9556-201ENSMUST00000182938 940 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm27218-201ENSMUST00000183745 392 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm27866-201ENSMUST00000184459 171 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm27782-201ENSMUST00000185059 199 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm7341-201ENSMUST00000192183 926 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Trbv27-201ENSMUST00000193711 277 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC6.84□□□□□ -1.31
ClpbQ60649 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm5418-201ENSMUST00000206932 528 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.84□□□□□ -1.31
ClpbQ60649 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.84□□□□□ -1.31
ClpbQ60649 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC6.84□□□□□ -1.31
ClpbQ60649 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC6.84□□□□□ -1.31
ClpbQ60649 AC172027.1-201ENSMUST00000217659 337 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 AC133598.4-201ENSMUST00000224577 454 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 AC107757.1-201ENSMUST00000226780 357 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
ClpbQ60649 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Mir455-201ENSMUST00000093594 82 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
ClpbQ60649 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
ClpbQ60649 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ClpbQ60649 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
ClpbQ60649 Gm44286-201ENSMUST00000204098 1487 ntBASIC6.84□□□□□ -1.31
ClpbQ60649 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.84□□□□□ -1.32
ClpbQ60649 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
ClpbQ60649 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
ClpbQ60649 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.84□□□□□ -1.32
ClpbQ60649 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
ClpbQ60649 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
ClpbQ60649 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ClpbQ60649 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
ClpbQ60649 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
ClpbQ60649 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
ClpbQ60649 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ClpbQ60649 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms