Protein–RNA interactions for Protein: Q3UJD6

Usp19, Ubiquitin carboxyl-terminal hydrolase 19, mousemouse

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp19Q3UJD6 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm22774-201ENSMUST00000102084 109 ntBASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm23276-201ENSMUST00000157913 138 ntBASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm3760-201ENSMUST00000167475 804 ntBASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm18808-201ENSMUST00000173316 462 ntBASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm26528-201ENSMUST00000181965 283 ntBASIC9.18□□□□□ -0.94
Usp19Q3UJD6 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 AL713985.1-201ENSMUST00000219030 420 ntBASIC9.18□□□□□ -0.94
Usp19Q3UJD6 AC079644.2-201ENSMUST00000220581 322 ntBASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm9267-201ENSMUST00000222831 404 ntBASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm37420-201ENSMUST00000195332 2912 ntBASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp19Q3UJD6 Gm10568-201ENSMUST00000193244 1634 ntBASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Gm11889-201ENSMUST00000118402 1079 ntBASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Gm14466-201ENSMUST00000119028 451 ntBASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Gm11370-201ENSMUST00000120583 260 ntBASIC9.17□□□□□ -0.94
Usp19Q3UJD6 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Gm8245-201ENSMUST00000182434 987 ntBASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Gm6074-201ENSMUST00000193340 451 ntBASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Gm3511-201ENSMUST00000199823 204 ntBASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Gm9231-201ENSMUST00000220817 1009 ntBASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Gm10126-201ENSMUST00000221732 168 ntBASIC9.17□□□□□ -0.94
Usp19Q3UJD6 AC154380.1-201ENSMUST00000226804 720 ntBASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 AC164978.1-201ENSMUST00000228608 4011 ntBASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp19Q3UJD6 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 CT030185.2-201ENSMUST00000222614 1310 ntBASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Gm15048-201ENSMUST00000118201 954 ntBASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Gm12890-201ENSMUST00000120885 373 ntBASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Mir1929-201ENSMUST00000158635 93 ntBASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Mir7235-201ENSMUST00000183796 56 ntBASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Gm2975-201ENSMUST00000209710 820 ntBASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Gm18907-201ENSMUST00000209719 932 ntBASIC9.16□□□□□ -0.94
Usp19Q3UJD6 AC174082.2-201ENSMUST00000222094 543 ntBASIC9.16□□□□□ -0.94
Usp19Q3UJD6 AC164436.1-201ENSMUST00000227074 772 ntBASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Gm9030-201ENSMUST00000218405 2410 ntBASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Gm9029-201ENSMUST00000219232 2410 ntBASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp19Q3UJD6 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms