Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm24369-201ENSMUST00000175387 96 ntBASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Gm27458-201ENSMUST00000185108 121 ntBASIC7.45□□□□□ -1.22
Trim43aQ3TL54 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Gm3103-201ENSMUST00000198073 752 ntBASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Gm43929-201ENSMUST00000203025 409 ntBASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Gm34424-201ENSMUST00000213400 782 ntBASIC7.45□□□□□ -1.22
Trim43aQ3TL54 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 AC132590.1-201ENSMUST00000224374 1164 ntBASIC7.45□□□□□ -1.22
Trim43aQ3TL54 AC154838.3-201ENSMUST00000228876 965 ntBASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Gm43515-201ENSMUST00000197930 2141 ntBASIC7.45□□□□□ -1.22
Trim43aQ3TL54 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm13930-201ENSMUST00000118569 368 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm11198-201ENSMUST00000119771 974 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm12630-201ENSMUST00000121575 784 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm24139-201ENSMUST00000122780 288 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm26182-201ENSMUST00000157688 116 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm26323-201ENSMUST00000157743 175 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm28894-201ENSMUST00000185214 615 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm37369-201ENSMUST00000194179 615 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm43040-201ENSMUST00000202399 558 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 AC160338.3-201ENSMUST00000214836 384 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 AC139941.1-201ENSMUST00000221517 478 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 AC125539.1-201ENSMUST00000227423 622 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm11855-201ENSMUST00000121562 1869 ntBASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim43aQ3TL54 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Defa-ps7-201ENSMUST00000117139 168 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Gm6382-201ENSMUST00000118873 942 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Gm7502-201ENSMUST00000169235 733 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Gm28006-201ENSMUST00000183841 122 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Trbv9-201ENSMUST00000194494 290 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Gm42580-201ENSMUST00000197223 753 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Gm43558-201ENSMUST00000200155 210 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 AC165287.1-201ENSMUST00000224985 178 ntBASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim43aQ3TL54 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms