Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Msh6P54276 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
Msh6P54276 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Msh6P54276 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Msh6P54276 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Msh6P54276 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
Msh6P54276 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Msh6P54276 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Msh6P54276 Gm23756-201ENSMUST00000157582 114 ntBASIC8.99□□□□□ -0.97
Msh6P54276 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC8.99□□□□□ -0.97
Msh6P54276 Gm10177-201ENSMUST00000160052 444 ntBASIC8.99□□□□□ -0.97
Msh6P54276 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Msh6P54276 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.99□□□□□ -0.97
Msh6P54276 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Msh6P54276 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Msh6P54276 Gm36935-201ENSMUST00000192526 292 ntBASIC8.99□□□□□ -0.97
Msh6P54276 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.99□□□□□ -0.97
Msh6P54276 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC8.99□□□□□ -0.97
Msh6P54276 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.99□□□□□ -0.97
Msh6P54276 Gm4962-201ENSMUST00000199640 2977 ntBASIC8.99□□□□□ -0.97
Msh6P54276 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Msh6P54276 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.99□□□□□ -0.97
Msh6P54276 AC155941.3-201ENSMUST00000218476 308 ntBASIC8.99□□□□□ -0.97
Msh6P54276 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Msh6P54276 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Msh6P54276 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Msh6P54276 Snora21-201ENSMUST00000082967 137 ntBASIC8.99□□□□□ -0.97
Msh6P54276 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Msh6P54276 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.98□□□□□ -0.97
Msh6P54276 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.98□□□□□ -0.97
Msh6P54276 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC8.98□□□□□ -0.97
Msh6P54276 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC8.98□□□□□ -0.97
Msh6P54276 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.98□□□□□ -0.97
Msh6P54276 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Msh6P54276 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC8.98□□□□□ -0.97
Msh6P54276 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.98□□□□□ -0.97
Msh6P54276 Gm26340-201ENSMUST00000102365 99 ntBASIC8.98□□□□□ -0.97
Msh6P54276 Gm25785-201ENSMUST00000104129 125 ntBASIC8.98□□□□□ -0.97
Msh6P54276 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC8.98□□□□□ -0.97
Msh6P54276 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC8.98□□□□□ -0.97
Msh6P54276 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Msh6P54276 Gm5711-201ENSMUST00000197896 421 ntBASIC8.98□□□□□ -0.97
Msh6P54276 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Msh6P54276 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC8.98□□□□□ -0.97
Msh6P54276 Gm9110-201ENSMUST00000219035 617 ntBASIC8.98□□□□□ -0.97
Msh6P54276 AC124601.1-201ENSMUST00000220531 135 ntBASIC8.98□□□□□ -0.97
Msh6P54276 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Msh6P54276 Mir296-201ENSMUST00000083587 79 ntBASIC8.98□□□□□ -0.97
Msh6P54276 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Msh6P54276 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Msh6P54276 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Msh6P54276 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Msh6P54276 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Msh6P54276 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Msh6P54276 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Msh6P54276 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Msh6P54276 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Msh6P54276 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Msh6P54276 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC8.97□□□□□ -0.97
Msh6P54276 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.97□□□□□ -0.97
Msh6P54276 Prkaa1-202ENSMUST00000228218 4618 ntBASIC8.97□□□□□ -0.97
Msh6P54276 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.97□□□□□ -0.97
Msh6P54276 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Msh6P54276 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.97□□□□□ -0.97
Msh6P54276 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Msh6P54276 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Msh6P54276 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Msh6P54276 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC8.97□□□□□ -0.97
Msh6P54276 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.97□□□□□ -0.97
Msh6P54276 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
Msh6P54276 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Msh6P54276 Mir697-201ENSMUST00000102316 109 ntBASIC8.97□□□□□ -0.97
Msh6P54276 Mir674-201ENSMUST00000102421 100 ntBASIC8.97□□□□□ -0.97
Msh6P54276 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Msh6P54276 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC8.97□□□□□ -0.97
Msh6P54276 Gm14466-201ENSMUST00000119028 451 ntBASIC8.97□□□□□ -0.97
Msh6P54276 Gm13754-201ENSMUST00000120486 998 ntBASIC8.97□□□□□ -0.97
Msh6P54276 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC8.97□□□□□ -0.97
Msh6P54276 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC8.97□□□□□ -0.97
Msh6P54276 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC8.97□□□□□ -0.97
Msh6P54276 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Msh6P54276 Gm37177-201ENSMUST00000193768 417 ntBASIC8.97□□□□□ -0.97
Msh6P54276 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Msh6P54276 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms