Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Shmt1P50431 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm42679-201ENSMUST00000197086 2906 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
Shmt1P50431 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm26417-201ENSMUST00000104274 135 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm9440-201ENSMUST00000119667 539 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Gm12104-201ENSMUST00000120359 979 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Gm13221-201ENSMUST00000121712 430 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.58□□□□□ -1.2
Shmt1P50431 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC7.58□□□□□ -1.2
Shmt1P50431 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm25640-201ENSMUST00000175378 125 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Gm20637-201ENSMUST00000175715 462 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm38022-201ENSMUST00000191762 403 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Gm37322-201ENSMUST00000193409 337 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Gm18944-201ENSMUST00000207672 643 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm34424-201ENSMUST00000213400 782 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC7.58□□□□□ -1.2
Shmt1P50431 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Shmt1P50431 AC133958.1-201ENSMUST00000227085 961 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Shmt1P50431 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Shmt1P50431 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm44996-201ENSMUST00000208787 2980 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm18632-201ENSMUST00000222597 2087 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Gm12608-201ENSMUST00000122013 1715 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Gm15229-201ENSMUST00000146636 1398 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Shmt1P50431 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Shmt1P50431 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Shmt1P50431 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Shmt1P50431 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.57□□□□□ -1.2
Shmt1P50431 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Shmt1P50431 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Shmt1P50431 Gm43970-201ENSMUST00000204346 3605 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Shmt1P50431 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Shmt1P50431 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Shmt1P50431 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Shmt1P50431 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Shmt1P50431 Gm12073-201ENSMUST00000117382 524 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Gm13878-201ENSMUST00000117986 577 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Gm14727-201ENSMUST00000118526 525 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Gm13900-201ENSMUST00000119402 498 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Gm8421-201ENSMUST00000119439 305 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Gm14721-201ENSMUST00000121381 525 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.57□□□□□ -1.2
Shmt1P50431 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC7.57□□□□□ -1.2
Shmt1P50431 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.57□□□□□ -1.2
Shmt1P50431 Gm9114-201ENSMUST00000188558 997 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Gm37669-201ENSMUST00000192184 820 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Gm8182-201ENSMUST00000197863 769 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC7.57□□□□□ -1.2
Shmt1P50431 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Shmt1P50431 Gm43926-201ENSMUST00000203978 430 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Gm2840-201ENSMUST00000048361 411 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Shmt1P50431 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Shmt1P50431 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Shmt1P50431 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Shmt1P50431 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Shmt1P50431 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Shmt1P50431 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.57□□□□□ -1.2
Shmt1P50431 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Shmt1P50431 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Shmt1P50431 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Shmt1P50431 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Shmt1P50431 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Shmt1P50431 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Shmt1P50431 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Shmt1P50431 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Shmt1P50431 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Shmt1P50431 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms