Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC8.9□□□□□ -0.98
Rfx1P48377 Gm43310-201ENSMUST00000198975 820 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 Gm18611-201ENSMUST00000200334 1118 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 Gm44253-201ENSMUST00000203387 628 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC8.9□□□□□ -0.98
Rfx1P48377 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC8.9□□□□□ -0.98
Rfx1P48377 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC8.9□□□□□ -0.98
Rfx1P48377 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC8.9□□□□□ -0.98
Rfx1P48377 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC8.9□□□□□ -0.98
Rfx1P48377 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rfx1P48377 AC154307.1-201ENSMUST00000214799 90 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC8.9□□□□□ -0.98
Rfx1P48377 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rfx1P48377 Gm18339-201ENSMUST00000218074 888 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 AC183092.2-201ENSMUST00000225542 1153 ntBASIC8.9□□□□□ -0.98
Rfx1P48377 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rfx1P48377 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rfx1P48377 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rfx1P48377 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Rfx1P48377 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rfx1P48377 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rfx1P48377 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Rfx1P48377 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Rfx1P48377 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.9□□□□□ -0.99
Rfx1P48377 Gm3563-201ENSMUST00000172963 1628 ntBASIC8.9□□□□□ -0.99
Rfx1P48377 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rfx1P48377 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rfx1P48377 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rfx1P48377 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Rfx1P48377 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Rfx1P48377 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rfx1P48377 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Rfx1P48377 Gm43981-201ENSMUST00000203285 1467 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.89□□□□□ -0.99
Rfx1P48377 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC8.89□□□□□ -0.99
Rfx1P48377 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Cyp19a1-203ENSMUST00000215736 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Rfx1P48377 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Gm14891-201ENSMUST00000117378 596 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Gm4918-201ENSMUST00000119420 1084 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Gm11901-201ENSMUST00000120412 437 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Gm11389-201ENSMUST00000121407 430 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Gm15057-201ENSMUST00000121516 534 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Gm12499-201ENSMUST00000121961 546 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC8.89□□□□□ -0.99
Rfx1P48377 Gm12930-201ENSMUST00000146679 676 ntTSL 3 BASIC8.89□□□□□ -0.99
Rfx1P48377 Gm24011-201ENSMUST00000157732 268 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Gm7162-201ENSMUST00000161205 1024 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Gm27033-201ENSMUST00000183226 544 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Gm28503-201ENSMUST00000185966 147 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Gm28573-201ENSMUST00000187821 380 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC8.89□□□□□ -0.99
Rfx1P48377 Gm21577-201ENSMUST00000190823 697 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Gm28400-201ENSMUST00000191332 380 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Mir1892-201ENSMUST00000197752 80 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC8.89□□□□□ -0.99
Rfx1P48377 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC8.89□□□□□ -0.99
Rfx1P48377 Gm45432-201ENSMUST00000210391 416 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC8.89□□□□□ -0.99
Rfx1P48377 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC8.89□□□□□ -0.99
Rfx1P48377 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC8.89□□□□□ -0.99
Rfx1P48377 AC192091.1-201ENSMUST00000218668 439 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Gm46317-201ENSMUST00000221103 393 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC8.89□□□□□ -0.99
Rfx1P48377 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.89□□□□□ -0.99
Rfx1P48377 AC154849.2-201ENSMUST00000223781 974 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 AC099629.1-201ENSMUST00000226778 464 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Ube2nl-201ENSMUST00000085228 456 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Rfx1P48377 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC8.89□□□□□ -0.99
Rfx1P48377 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Rfx1P48377 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Rfx1P48377 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Rfx1P48377 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Rfx1P48377 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Gm17137-201ENSMUST00000164106 4371 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.89□□□□□ -0.99
Rfx1P48377 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rfx1P48377 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Rfx1P48377 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms