Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Traf1P39428 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Traf1P39428 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Traf1P39428 Gm38381-201ENSMUST00000193594 2275 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Traf1P39428 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Traf1P39428 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.29□□□□□ -1.08
Traf1P39428 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC8.29□□□□□ -1.08
Traf1P39428 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Traf1P39428 AC153143.1-201ENSMUST00000222966 1340 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Traf1P39428 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Traf1P39428 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.28□□□□□ -1.08
Traf1P39428 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
Traf1P39428 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Traf1P39428 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.28□□□□□ -1.08
Traf1P39428 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
Traf1P39428 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.28□□□□□ -1.08
Traf1P39428 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Traf1P39428 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Traf1P39428 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.28□□□□□ -1.08
Traf1P39428 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Traf1P39428 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.28□□□□□ -1.08
Traf1P39428 AC156636.1-201ENSMUST00000218639 2229 ntBASIC8.28□□□□□ -1.08
Traf1P39428 Gm13798-201ENSMUST00000118285 139 ntBASIC8.28□□□□□ -1.08
Traf1P39428 Gm12740-201ENSMUST00000118794 308 ntBASIC8.28□□□□□ -1.08
Traf1P39428 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.28□□□□□ -1.08
Traf1P39428 Gm22275-201ENSMUST00000122470 310 ntBASIC8.28□□□□□ -1.08
Traf1P39428 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC8.28□□□□□ -1.08
Traf1P39428 Gm7426-201ENSMUST00000179046 404 ntBASIC8.28□□□□□ -1.08
Traf1P39428 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC8.28□□□□□ -1.08
Traf1P39428 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.28□□□□□ -1.08
Traf1P39428 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.28□□□□□ -1.08
Traf1P39428 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Traf1P39428 Gm34424-201ENSMUST00000213400 782 ntBASIC8.28□□□□□ -1.08
Traf1P39428 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Traf1P39428 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC8.28□□□□□ -1.08
Traf1P39428 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC8.28□□□□□ -1.08
Traf1P39428 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC8.28□□□□□ -1.08
Traf1P39428 Gm10126-201ENSMUST00000221732 168 ntBASIC8.28□□□□□ -1.08
Traf1P39428 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Traf1P39428 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Traf1P39428 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Traf1P39428 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC8.28□□□□□ -1.08
Traf1P39428 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Traf1P39428 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Traf1P39428 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.28□□□□□ -1.08
Traf1P39428 AC120347.2-201ENSMUST00000222224 2015 ntBASIC8.28□□□□□ -1.08
Traf1P39428 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC8.28□□□□□ -1.08
Traf1P39428 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Traf1P39428 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Traf1P39428 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Traf1P39428 Gm42597-201ENSMUST00000196663 1544 ntBASIC8.28□□□□□ -1.08
Traf1P39428 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Traf1P39428 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Traf1P39428 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Traf1P39428 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Traf1P39428 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.28□□□□□ -1.08
Traf1P39428 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC8.27□□□□□ -1.08
Traf1P39428 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
Traf1P39428 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
Traf1P39428 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
Traf1P39428 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
Traf1P39428 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Traf1P39428 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Traf1P39428 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC8.27□□□□□ -1.09
Traf1P39428 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Traf1P39428 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Traf1P39428 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Traf1P39428 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.27□□□□□ -1.09
Traf1P39428 Gm44289-201ENSMUST00000204144 1390 ntBASIC8.27□□□□□ -1.09
Traf1P39428 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Traf1P39428 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Traf1P39428 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Traf1P39428 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC8.27□□□□□ -1.09
Traf1P39428 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC8.27□□□□□ -1.09
Traf1P39428 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC8.27□□□□□ -1.09
Traf1P39428 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC8.27□□□□□ -1.09
Traf1P39428 Gm12710-201ENSMUST00000119011 216 ntBASIC8.27□□□□□ -1.09
Traf1P39428 Gm26357-201ENSMUST00000158218 115 ntBASIC8.27□□□□□ -1.09
Traf1P39428 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Traf1P39428 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Traf1P39428 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.27□□□□□ -1.09
Traf1P39428 Gm38022-201ENSMUST00000191762 403 ntBASIC8.27□□□□□ -1.09
Traf1P39428 Gm43905-201ENSMUST00000204516 204 ntBASIC8.27□□□□□ -1.09
Traf1P39428 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC8.27□□□□□ -1.09
Traf1P39428 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC8.27□□□□□ -1.09
Traf1P39428 Gm35638-201ENSMUST00000220724 652 ntBASIC8.27□□□□□ -1.09
Traf1P39428 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Traf1P39428 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC8.27□□□□□ -1.09
Traf1P39428 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Traf1P39428 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Traf1P39428 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.27□□□□□ -1.09
Traf1P39428 Gm43707-201ENSMUST00000196451 3187 ntBASIC8.27□□□□□ -1.09
Traf1P39428 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Traf1P39428 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Traf1P39428 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Traf1P39428 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms