Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
Mmp13P33435 Gm19092-201ENSMUST00000209036 969 ntBASIC7.16□□□□□ -1.26
Mmp13P33435 Gm19056-201ENSMUST00000218220 797 ntBASIC7.16□□□□□ -1.26
Mmp13P33435 Gm19217-201ENSMUST00000218238 328 ntBASIC7.16□□□□□ -1.26
Mmp13P33435 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.16□□□□□ -1.26
Mmp13P33435 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Mmp13P33435 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Mmp13P33435 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Mmp13P33435 Gm22504-201ENSMUST00000082963 139 ntBASIC7.16□□□□□ -1.26
Mmp13P33435 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Mmp13P33435 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Mmp13P33435 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC7.16□□□□□ -1.26
Mmp13P33435 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Mmp13P33435 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC7.16□□□□□ -1.26
Mmp13P33435 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Mmp13P33435 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Mmp13P33435 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Mmp13P33435 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.16□□□□□ -1.26
Mmp13P33435 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.16□□□□□ -1.26
Mmp13P33435 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.16□□□□□ -1.26
Mmp13P33435 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.16□□□□□ -1.26
Mmp13P33435 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Mmp13P33435 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.16□□□□□ -1.26
Mmp13P33435 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC7.16□□□□□ -1.26
Mmp13P33435 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Mmp13P33435 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Mmp13P33435 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Mmp13P33435 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Mmp13P33435 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Mmp13P33435 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC7.15□□□□□ -1.26
Mmp13P33435 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Mmp13P33435 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Mmp13P33435 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.15□□□□□ -1.26
Mmp13P33435 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.15□□□□□ -1.26
Mmp13P33435 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.15□□□□□ -1.26
Mmp13P33435 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Mmp13P33435 Gm11517-201ENSMUST00000119491 387 ntBASIC7.15□□□□□ -1.26
Mmp13P33435 Gm13940-201ENSMUST00000121023 301 ntBASIC7.15□□□□□ -1.26
Mmp13P33435 Gm4887-201ENSMUST00000122230 1053 ntBASIC7.15□□□□□ -1.26
Mmp13P33435 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Mmp13P33435 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC7.15□□□□□ -1.26
Mmp13P33435 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Mmp13P33435 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.15□□□□□ -1.26
Mmp13P33435 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Mmp13P33435 Gm25180-201ENSMUST00000157746 115 ntBASIC7.15□□□□□ -1.26
Mmp13P33435 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC7.15□□□□□ -1.26
Mmp13P33435 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.15□□□□□ -1.26
Mmp13P33435 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Mmp13P33435 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Mmp13P33435 AC164550.1-201ENSMUST00000217821 1066 ntBASIC7.15□□□□□ -1.26
Mmp13P33435 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.15□□□□□ -1.26
Mmp13P33435 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Mmp13P33435 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Mmp13P33435 Gm26130-201ENSMUST00000083171 138 ntBASIC7.15□□□□□ -1.26
Mmp13P33435 Gm25007-201ENSMUST00000083808 133 ntBASIC7.15□□□□□ -1.26
Mmp13P33435 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Mmp13P33435 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC7.15□□□□□ -1.26
Mmp13P33435 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
Mmp13P33435 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Mmp13P33435 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Mmp13P33435 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Mmp13P33435 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.27
Mmp13P33435 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Mmp13P33435 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Mmp13P33435 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Mmp13P33435 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Mmp13P33435 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.15□□□□□ -1.27
Mmp13P33435 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Mmp13P33435 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Mmp13P33435 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Mmp13P33435 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Mmp13P33435 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Mmp13P33435 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Mmp13P33435 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Mmp13P33435 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Mmp13P33435 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Mmp13P33435 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Mmp13P33435 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Mmp13P33435 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Mmp13P33435 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Mmp13P33435 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.14□□□□□ -1.27
Mmp13P33435 Gm17170-201ENSMUST00000112785 316 ntBASIC7.14□□□□□ -1.27
Mmp13P33435 Gm13878-201ENSMUST00000117986 577 ntBASIC7.14□□□□□ -1.27
Mmp13P33435 Gm14158-201ENSMUST00000118409 308 ntBASIC7.14□□□□□ -1.27
Mmp13P33435 Gm14796-201ENSMUST00000121216 959 ntBASIC7.14□□□□□ -1.27
Mmp13P33435 Gm12181-201ENSMUST00000121448 531 ntBASIC7.14□□□□□ -1.27
Mmp13P33435 Gm14612-201ENSMUST00000121522 881 ntBASIC7.14□□□□□ -1.27
Mmp13P33435 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.14□□□□□ -1.27
Mmp13P33435 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Mmp13P33435 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Mmp13P33435 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Mmp13P33435 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Mmp13P33435 Gm27026-201ENSMUST00000183003 892 ntBASIC7.14□□□□□ -1.27
Mmp13P33435 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.14□□□□□ -1.27
Mmp13P33435 Gm18352-201ENSMUST00000189113 902 ntBASIC7.14□□□□□ -1.27
Mmp13P33435 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC7.14□□□□□ -1.27
Mmp13P33435 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Mmp13P33435 Gm7512-201ENSMUST00000195217 1170 ntBASIC7.14□□□□□ -1.27
Mmp13P33435 Gm37891-201ENSMUST00000195585 1326 ntBASIC7.14□□□□□ -1.27
Mmp13P33435 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms