Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm17158-201ENSMUST00000168150 493 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm20394-201ENSMUST00000173304 942 ntTSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm7577-201ENSMUST00000182543 982 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm28625-201ENSMUST00000188309 205 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm29195-201ENSMUST00000189038 379 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Mir6375-201ENSMUST00000197176 95 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 1700041I07Rik-201ENSMUST00000197536 435 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm43310-201ENSMUST00000198975 820 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm44225-201ENSMUST00000203582 186 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm17834-201ENSMUST00000204322 891 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm44623-201ENSMUST00000207934 434 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm45238-201ENSMUST00000210204 517 ntTSL 2 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm45436-201ENSMUST00000210729 469 ntTSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Olfr61-204ENSMUST00000211685 1212 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Hoxd3P09027 AC120386.1-201ENSMUST00000213434 736 ntTSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 AC142407.1-201ENSMUST00000214371 494 ntTSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm18557-201ENSMUST00000218710 433 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 AC211878.7-201ENSMUST00000222851 661 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 AC124489.2-201ENSMUST00000223930 589 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 AC163038.3-201ENSMUST00000223945 558 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm6187-201ENSMUST00000040649 960 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 1700010B08Rik-201ENSMUST00000073081 899 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Tas2r138-201ENSMUST00000076565 996 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm10335-201ENSMUST00000096020 468 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Olfr659-201ENSMUST00000098170 969 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm10132-201ENSMUST00000099431 468 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Rasgrf2-201ENSMUST00000099326 3567 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Srp54b-201ENSMUST00000164243 2317 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm19136-201ENSMUST00000190706 2067 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Nek10-203ENSMUST00000112631 3386 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm44280-201ENSMUST00000204498 3111 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 D830005E20Rik-201ENSMUST00000217716 1844 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Mrpl11-201ENSMUST00000025836 2882 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Prune2-207ENSMUST00000225351 2115 ntBASIC6.68□□□□□ -1.34
Hoxd3P09027 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Adcy4-202ENSMUST00000170223 3501 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Cpa4-201ENSMUST00000049251 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gpatch2-206ENSMUST00000160471 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 AU021092-201ENSMUST00000050160 1363 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Pou2f1-216ENSMUST00000184643 2201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxd3P09027 Gm15127-202ENSMUST00000101190 1972 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Hoxd3P09027 Eci2-213ENSMUST00000178421 1414 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Snapc4-202ENSMUST00000114115 4368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Trak2-205ENSMUST00000174120 2636 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Bves-201ENSMUST00000095715 4368 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gprasp2-211ENSMUST00000173804 3814 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Fas-201ENSMUST00000025691 1486 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm14273-201ENSMUST00000136315 1786 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Tex24-201ENSMUST00000095375 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gca-201ENSMUST00000028257 3330 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Rbm6-ps2-201ENSMUST00000186440 1534 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm13081-201ENSMUST00000121527 5599 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Ablim1-205ENSMUST00000111526 2164 ntTSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Arl14epl-201ENSMUST00000097580 2169 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm43376-201ENSMUST00000198939 1887 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm43280-201ENSMUST00000202958 1550 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gatb-204ENSMUST00000127348 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm25607-201ENSMUST00000104020 127 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm12385-201ENSMUST00000117439 795 ntBASIC6.67□□□□□ -1.34
Hoxd3P09027 Gm14336-201ENSMUST00000117491 475 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 126.4 ms