Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC123705.1-201ENSMUST00000222512 2058 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Zfx-202ENSMUST00000113925 879 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm12365-201ENSMUST00000117931 568 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm15616-201ENSMUST00000118662 375 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm11969-201ENSMUST00000118848 356 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm4911-201ENSMUST00000119388 945 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm13038-201ENSMUST00000119886 459 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC5.67□□□□□ -1.5
Hmgb3O54879 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Defa-ps3-201ENSMUST00000142705 282 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Mir8099-2-201ENSMUST00000183568 127 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Mir8099-1-201ENSMUST00000184238 127 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm21013-201ENSMUST00000184952 1201 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm8870-201ENSMUST00000188170 775 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm29126-201ENSMUST00000188686 151 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm38022-201ENSMUST00000191762 403 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm37152-201ENSMUST00000193369 1175 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm8925-201ENSMUST00000197212 763 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm29977-201ENSMUST00000206804 724 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm45394-201ENSMUST00000209240 1175 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm45506-201ENSMUST00000211620 280 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm4780-201ENSMUST00000213206 1242 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 2900045O20Rik-201ENSMUST00000218374 1292 ntTSL 2 BASIC5.67□□□□□ -1.5
Hmgb3O54879 AC155941.3-201ENSMUST00000218476 308 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 AC124686.1-201ENSMUST00000225546 522 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 AC116487.1-201ENSMUST00000227033 339 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm26130-201ENSMUST00000083171 138 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Mir135b-201ENSMUST00000083501 97 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm8878-201ENSMUST00000173552 1725 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm42940-201ENSMUST00000200361 2362 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Hmgb3O54879 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm37914-201ENSMUST00000195317 2679 ntBASIC5.67□□□□□ -1.5
Hmgb3O54879 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hmgb3O54879 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Hmgb3O54879 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm18359-201ENSMUST00000173024 1459 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm14935-201ENSMUST00000121528 1708 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm45001-201ENSMUST00000208279 2515 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm7785-201ENSMUST00000117121 892 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm14893-201ENSMUST00000117904 282 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm13325-201ENSMUST00000118746 806 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm2735-201ENSMUST00000136133 277 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC5.66□□□□□ -1.5
Hmgb3O54879 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm8046-201ENSMUST00000172151 616 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm24369-201ENSMUST00000175387 96 ntBASIC5.66□□□□□ -1.5
Hmgb3O54879 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Hmgb3O54879 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms