Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm43684-201ENSMUST00000199279 6573 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 AC156802.2-201ENSMUST00000225239 5740 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm24395-201ENSMUST00000158139 125 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Cfhr3-201ENSMUST00000170441 1022 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm27854-201ENSMUST00000175578 244 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm8192-201ENSMUST00000182196 958 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm28023-201ENSMUST00000184556 60 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm27825-201ENSMUST00000184586 60 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm43576-201ENSMUST00000197937 871 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm43501-201ENSMUST00000202513 107 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm9535-201ENSMUST00000218499 768 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 AC147782.1-201ENSMUST00000219169 475 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm35619-201ENSMUST00000222548 600 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC7.2□□□□□ -1.26
Col4a6B1AVK5 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm6977-201ENSMUST00000121568 512 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm45734-201ENSMUST00000211916 411 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 CT009738.1-201ENSMUST00000219031 809 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm24621-201ENSMUST00000082679 140 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm44916-201ENSMUST00000208664 2194 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms