Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm23387-201ENSMUST00000158586 107 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm4545-201ENSMUST00000190797 603 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm43015-201ENSMUST00000199087 565 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm27680-202ENSMUST00000199221 807 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 AC145736.1-201ENSMUST00000214661 479 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm11149-202ENSMUST00000215070 1169 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 AC155941.3-201ENSMUST00000218476 308 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm46317-201ENSMUST00000221103 393 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 AL837512.1-201ENSMUST00000223914 1073 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 CT009556.3-201ENSMUST00000226173 513 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 AC112142.1-206ENSMUST00000228136 982 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 AC107453.3-201ENSMUST00000228205 639 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Hibch-202ENSMUST00000159352 1704 ntTSL 5 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm8204-201ENSMUST00000185696 2144 ntBASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Casq2-201ENSMUST00000029454 2556 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Ube3bQ9ES34 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm38147-201ENSMUST00000192397 1798 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm13526-201ENSMUST00000117970 189 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm13858-201ENSMUST00000118862 671 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm12219-201ENSMUST00000119198 443 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm11809-201ENSMUST00000120923 950 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm12103-201ENSMUST00000121892 362 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm25052-201ENSMUST00000122661 158 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Mir3085-201ENSMUST00000175493 89 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm18709-201ENSMUST00000180564 489 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm5575-201ENSMUST00000190879 398 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm36961-201ENSMUST00000191980 132 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm37463-201ENSMUST00000193819 796 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm43560-201ENSMUST00000198100 773 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm43472-201ENSMUST00000200175 154 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm31532-201ENSMUST00000203555 767 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 AC163621.1-201ENSMUST00000220695 379 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 AC154184.2-201ENSMUST00000225335 349 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 AC139569.1-201ENSMUST00000226080 614 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm22578-201ENSMUST00000083730 107 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 AC158686.1-201ENSMUST00000218068 2332 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm37367-201ENSMUST00000191771 2602 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Gm36993-201ENSMUST00000192983 2980 ntBASIC9.4□□□□□ -0.9
Ube3bQ9ES34 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ube3bQ9ES34 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC9.4□□□□□ -0.91
Ube3bQ9ES34 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC9.4□□□□□ -0.91
Ube3bQ9ES34 Gm38189-201ENSMUST00000194495 1457 ntBASIC9.4□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms