Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Gm15644-201ENSMUST00000121764 387 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Gm24300-201ENSMUST00000177809 109 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Gm24017-201ENSMUST00000178726 109 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Gm23952-201ENSMUST00000179380 109 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Gm26729-201ENSMUST00000180744 352 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Gm34144-201ENSMUST00000197039 259 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Gm44566-201ENSMUST00000207638 304 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 AC127224.1-201ENSMUST00000218094 453 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 n-R5s29-201ENSMUST00000082836 119 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm16357-201ENSMUST00000144091 474 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm25989-201ENSMUST00000158761 133 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm24369-201ENSMUST00000175387 96 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm27684-201ENSMUST00000183778 80 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm29369-201ENSMUST00000190674 615 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 AC153936.1-201ENSMUST00000219874 395 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm6887-201ENSMUST00000080945 482 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms