Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Gm11865-201ENSMUST00000118093 859 ntBASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 AC161374.1-201ENSMUST00000224191 794 ntBASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 AC152940.1-201ENSMUST00000226504 139 ntBASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Chmp4bQ9D8B3 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Gm15739-201ENSMUST00000118049 872 ntBASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Gm24057-201ENSMUST00000158616 302 ntBASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Gm5119-201ENSMUST00000215858 634 ntBASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Gcnt2-204ENSMUST00000223570 335 ntBASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Gm43872-201ENSMUST00000203218 2213 ntBASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Chmp4bQ9D8B3 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Gm45876-201ENSMUST00000212698 2709 ntBASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 AC122024.1-201ENSMUST00000219276 4850 ntBASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Gm14279-201ENSMUST00000117142 332 ntBASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Gm10243-201ENSMUST00000117571 333 ntBASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Gm9697-201ENSMUST00000147052 997 ntBASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Gm17833-201ENSMUST00000197629 1065 ntBASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Gm17611-202ENSMUST00000220613 814 ntBASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Gm10247-201ENSMUST00000090395 333 ntBASIC8.91□□□□□ -0.98
Chmp4bQ9D8B3 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms