Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm6490-201ENSMUST00000111862 461 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm11850-201ENSMUST00000119679 479 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm14202-201ENSMUST00000120121 311 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm25770-201ENSMUST00000158566 115 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm16027-201ENSMUST00000161618 758 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm28428-201ENSMUST00000188886 697 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm9497-201ENSMUST00000199908 538 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 AC157650.2-201ENSMUST00000224666 328 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm23058-201ENSMUST00000093703 107 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm42549-201ENSMUST00000202392 7004 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 AC154734.1-201ENSMUST00000219957 2141 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Ddx56Q9D0R4 AC124414.1-201ENSMUST00000218033 2946 ntBASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm14480-201ENSMUST00000118521 433 ntBASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm11320-201ENSMUST00000119434 463 ntBASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm15644-201ENSMUST00000121764 387 ntBASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm6610-201ENSMUST00000186324 358 ntBASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm20813-201ENSMUST00000186646 705 ntBASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm21923-201ENSMUST00000188455 696 ntBASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm2505-201ENSMUST00000200413 825 ntBASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm44566-201ENSMUST00000207638 304 ntBASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm19201-201ENSMUST00000210127 778 ntBASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 AC158981.1-201ENSMUST00000226943 1205 ntBASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Gm43062-201ENSMUST00000196302 1319 ntBASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Ddx56Q9D0R4 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms