Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Gm17205-201ENSMUST00000168370 1207 ntBASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Gm4956-202ENSMUST00000178869 672 ntBASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Gm17786-201ENSMUST00000182000 427 ntBASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Gm8524-201ENSMUST00000186232 379 ntBASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Gm37689-201ENSMUST00000193139 275 ntBASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Gm3511-201ENSMUST00000199823 204 ntBASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Gm38430-201ENSMUST00000209888 1240 ntBASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Rpa3Q9CQ71 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 AC158988.1-201ENSMUST00000226731 2624 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm23027-201ENSMUST00000158771 158 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm17212-201ENSMUST00000166666 259 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm43664-201ENSMUST00000196038 734 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm19175-201ENSMUST00000199895 916 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm10126-201ENSMUST00000221732 168 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 AC154692.1-202ENSMUST00000226632 1231 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Mir455-201ENSMUST00000093594 82 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm45793-201ENSMUST00000207900 1342 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm44863-201ENSMUST00000207613 1422 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm43728-201ENSMUST00000198817 2622 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm10259-201ENSMUST00000091289 1590 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm44186-201ENSMUST00000204118 2752 ntBASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Rpa3Q9CQ71 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.4□□□□□ -1.22
Rpa3Q9CQ71 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Rpa3Q9CQ71 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 160 ms