Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm13878-201ENSMUST00000117986 577 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm8812-201ENSMUST00000118496 412 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm13525-201ENSMUST00000120607 478 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm26323-201ENSMUST00000157743 175 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm22552-201ENSMUST00000157796 337 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Mir8094-201ENSMUST00000183361 117 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm21577-201ENSMUST00000190823 697 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm45259-201ENSMUST00000209217 1006 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 AC157650.2-201ENSMUST00000224666 328 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm20900-201ENSMUST00000078729 472 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.86□□□□□ -1.31
Cstf3Q99LI7 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.86□□□□□ -1.31
Cstf3Q99LI7 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm6490-201ENSMUST00000111862 461 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm6047-201ENSMUST00000167221 574 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm18558-201ENSMUST00000186253 1214 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm29354-201ENSMUST00000187613 696 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm38840-201ENSMUST00000204716 843 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm9240-201ENSMUST00000206527 742 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm34424-201ENSMUST00000213400 782 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 AV026068-229ENSMUST00000225516 595 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm16020-201ENSMUST00000084281 210 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Cstf3Q99LI7 Gm11282-201ENSMUST00000119018 1416 ntBASIC6.84□□□□□ -1.31
Cstf3Q99LI7 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.84□□□□□ -1.31
Cstf3Q99LI7 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cstf3Q99LI7 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cstf3Q99LI7 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Cstf3Q99LI7 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms