Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm22150-201ENSMUST00000104447 135 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm23323-201ENSMUST00000104471 133 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm13325-201ENSMUST00000118746 806 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm13521-201ENSMUST00000118922 866 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm11928-201ENSMUST00000119323 437 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm11320-201ENSMUST00000119434 463 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm14716-201ENSMUST00000120138 718 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm12654-201ENSMUST00000120387 587 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm9670-201ENSMUST00000121201 540 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm23657-201ENSMUST00000122623 294 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm28677-202ENSMUST00000186904 615 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm45712-201ENSMUST00000212417 335 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm18378-201ENSMUST00000216245 628 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc28bQ8CEG5 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Gm41-201ENSMUST00000116183 1023 ntBASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Gm13469-201ENSMUST00000118231 350 ntBASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Gm8812-201ENSMUST00000118496 412 ntBASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Gm11850-201ENSMUST00000119679 479 ntBASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Gm4914-201ENSMUST00000119757 459 ntBASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ccdc28bQ8CEG5 Gm7678-201ENSMUST00000181879 943 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms