Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm36935-201ENSMUST00000192526 292 ntBASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm42734-201ENSMUST00000201656 878 ntBASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm38840-201ENSMUST00000204716 843 ntBASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm18562-201ENSMUST00000209949 915 ntBASIC8.32□□□□□ -1.08
Nup88Q8CEC0 AC133958.1-201ENSMUST00000227085 961 ntBASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm10108-201ENSMUST00000078246 319 ntBASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Nup88Q8CEC0 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Gm18726-201ENSMUST00000218175 2010 ntBASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 AC154257.1-201ENSMUST00000224811 1525 ntBASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 AC151984.1-201ENSMUST00000218261 2976 ntBASIC8.31□□□□□ -1.08
Nup88Q8CEC0 CT030166.4-201ENSMUST00000220640 404 ntBASIC8.31□□□□□ -1.08
Nup88Q8CEC0 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Glycam1-204ENSMUST00000228895 641 ntBASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 n-R5s60-201ENSMUST00000083299 119 ntBASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 AC154522.1-201ENSMUST00000224647 1903 ntBASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Nup88Q8CEC0 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Gm20768-201ENSMUST00000199527 2338 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Gm17170-201ENSMUST00000112785 316 ntBASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup88Q8CEC0 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms