Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Gm18428-201ENSMUST00000194986 791 ntBASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Gm2287-201ENSMUST00000197417 1084 ntBASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Gm43226-201ENSMUST00000202438 259 ntBASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Gm44192-201ENSMUST00000204195 556 ntBASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 CT030260.1-201ENSMUST00000223243 442 ntBASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Gm16020-201ENSMUST00000084281 210 ntBASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Lrif1Q8CDD9 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm45360-201ENSMUST00000210698 1405 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Mir669e-201ENSMUST00000117003 119 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm14893-201ENSMUST00000117904 282 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 n-R5s47-201ENSMUST00000122516 119 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm22206-201ENSMUST00000158612 116 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm23639-201ENSMUST00000175078 132 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm21430-201ENSMUST00000182998 998 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm27458-201ENSMUST00000185108 121 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm28952-201ENSMUST00000189285 681 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm29435-201ENSMUST00000191310 689 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm18562-201ENSMUST00000209949 915 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm45319-201ENSMUST00000210220 318 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 AC154382.1-201ENSMUST00000220958 1282 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.94□□□□□ -1.3
Lrif1Q8CDD9 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms