Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Pcdhb7-201ENSMUST00000053037 3501 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Arap1-203ENSMUST00000098243 3693 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Arhgdib-203ENSMUST00000111892 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Serpina3h-202ENSMUST00000116393 1226 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm13130-201ENSMUST00000119195 1166 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm12993-201ENSMUST00000119900 479 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm13024-201ENSMUST00000121756 718 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Snrpert-201ENSMUST00000121967 279 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm24442-201ENSMUST00000157238 327 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm24782-201ENSMUST00000157641 132 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm25372-201ENSMUST00000158161 255 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm23639-201ENSMUST00000175078 132 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm10182-201ENSMUST00000178676 273 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm9373-201ENSMUST00000208724 599 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm42998-201ENSMUST00000197053 2371 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Art4-201ENSMUST00000032341 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Mterf2-201ENSMUST00000050813 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Sox6-203ENSMUST00000166207 2825 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm37549-201ENSMUST00000194096 4065 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Slc25a13-201ENSMUST00000015256 3067 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 AC154257.1-201ENSMUST00000224811 1525 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm10472-201ENSMUST00000193014 2102 ntBASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Gm30373-202ENSMUST00000217507 2709 ntTSL 5 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Ctbp2-214ENSMUST00000169570 3604 ntTSL 5 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Adamtsl1-209ENSMUST00000141889 7805 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Scaf8Q6DID3 Sept2-213ENSMUST00000168776 3267 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Pou2f1-216ENSMUST00000184643 2201 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Dennd2d-204ENSMUST00000183271 2050 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Gatad2b-201ENSMUST00000049382 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Casp8-203ENSMUST00000190213 1628 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 CT009515.4-201ENSMUST00000228165 1494 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Zfp940-201ENSMUST00000085792 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Rpap3-ps2-201ENSMUST00000184741 2161 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 AC154355.1-201ENSMUST00000224604 2162 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Olfr549-202ENSMUST00000217478 1891 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Drp2-204ENSMUST00000113228 3141 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Mir669e-201ENSMUST00000117003 119 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Gm11810-201ENSMUST00000118311 333 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Gm23657-201ENSMUST00000122623 294 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Gm16102-201ENSMUST00000160955 420 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Gm24083-201ENSMUST00000175174 120 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Gm22702-201ENSMUST00000175372 69 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Gm21182-201ENSMUST00000178899 794 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Gm27026-201ENSMUST00000183003 892 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Gm18406-201ENSMUST00000185872 669 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Gm29389-201ENSMUST00000191562 352 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Gm38149-201ENSMUST00000191943 339 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Ighv1-29-201ENSMUST00000194116 342 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 CU024910.1-201ENSMUST00000214310 418 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 AC154426.1-201ENSMUST00000225614 1132 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 AC139209.2-201ENSMUST00000227680 1208 ntBASIC9.6□□□□□ -0.87
Scaf8Q6DID3 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Scaf8Q6DID3 AC115735.5-201ENSMUST00000228386 397 ntBASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 118.4 ms