Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.41□□□□□ -1.06
Vps54Q5SPW0 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
Vps54Q5SPW0 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Gm14729-201ENSMUST00000118373 689 ntBASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Gm3326-201ENSMUST00000164656 1043 ntBASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Ighv1-30-201ENSMUST00000194082 349 ntBASIC8.4□□□□□ -1.06
Vps54Q5SPW0 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Gm4585-201ENSMUST00000207218 452 ntBASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Gm44982-201ENSMUST00000208795 471 ntBASIC8.4□□□□□ -1.06
Vps54Q5SPW0 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.4□□□□□ -1.06
Vps54Q5SPW0 AC135292.2-201ENSMUST00000227559 367 ntBASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Vps54Q5SPW0 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Vps54Q5SPW0 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.07
Vps54Q5SPW0 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.07
Vps54Q5SPW0 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Vps54Q5SPW0 Gm9030-201ENSMUST00000218405 2410 ntBASIC8.4□□□□□ -1.07
Vps54Q5SPW0 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Vps54Q5SPW0 Gm9029-201ENSMUST00000219232 2410 ntBASIC8.4□□□□□ -1.07
Vps54Q5SPW0 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Vps54Q5SPW0 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Vps54Q5SPW0 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
Vps54Q5SPW0 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Vps54Q5SPW0 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Vps54Q5SPW0 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.4□□□□□ -1.07
Vps54Q5SPW0 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Vps54Q5SPW0 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Vps54Q5SPW0 AC154597.1-201ENSMUST00000224095 2713 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm44185-201ENSMUST00000204539 3307 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm7690-201ENSMUST00000190885 1399 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 CT030185.2-201ENSMUST00000222614 1310 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm11858-201ENSMUST00000117935 838 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm25574-201ENSMUST00000175245 249 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm4956-202ENSMUST00000178869 672 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm21054-201ENSMUST00000203981 380 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm9357-201ENSMUST00000207138 805 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm2774-201ENSMUST00000213650 1165 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm4042-201ENSMUST00000216946 637 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 AC153152.2-201ENSMUST00000223165 959 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 AL837512.1-201ENSMUST00000223914 1073 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 AC131033.1-201ENSMUST00000228223 279 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Vps54Q5SPW0 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Vps54Q5SPW0 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms