Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm44353-201ENSMUST00000200618 138 ntBASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm42857-201ENSMUST00000200823 339 ntBASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm8607-201ENSMUST00000221864 431 ntBASIC9.4□□□□□ -0.9
Usp48Q3V0C5 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Gm5250-201ENSMUST00000059065 321 ntBASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Usp48Q3V0C5 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC9.4□□□□□ -0.91
Usp48Q3V0C5 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Usp48Q3V0C5 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Usp48Q3V0C5 Gm43254-201ENSMUST00000199187 2491 ntBASIC9.4□□□□□ -0.91
Usp48Q3V0C5 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC9.4□□□□□ -0.91
Usp48Q3V0C5 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Usp48Q3V0C5 Gm6545-201ENSMUST00000217186 1786 ntBASIC9.4□□□□□ -0.91
Usp48Q3V0C5 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Usp48Q3V0C5 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Usp48Q3V0C5 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm24195-201ENSMUST00000116804 137 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm14279-201ENSMUST00000117142 332 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm10243-201ENSMUST00000117571 333 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm11810-201ENSMUST00000118311 333 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm11850-201ENSMUST00000119679 479 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm7212-201ENSMUST00000120817 348 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm26321-201ENSMUST00000157740 242 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm26738-201ENSMUST00000181312 601 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm7481-201ENSMUST00000182020 995 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm21742-201ENSMUST00000189352 548 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm4856-201ENSMUST00000192696 1091 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm6522-201ENSMUST00000197160 1203 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm44279-201ENSMUST00000205154 472 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm40853-201ENSMUST00000221342 582 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm9255-201ENSMUST00000223225 581 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 AL671874.1-201ENSMUST00000223746 1123 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 AC091237.1-201ENSMUST00000224911 637 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 AC164883.2-201ENSMUST00000227931 3815 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm10247-201ENSMUST00000090395 333 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm28720-201ENSMUST00000190728 3156 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm18066-201ENSMUST00000210904 1774 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm7562-201ENSMUST00000210502 2537 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm38697-201ENSMUST00000198061 1746 ntBASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC9.39□□□□□ -0.91
Usp48Q3V0C5 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp48Q3V0C5 AC091783.1-201ENSMUST00000223614 1613 ntBASIC9.38□□□□□ -0.91
Usp48Q3V0C5 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp48Q3V0C5 Gm8822-201ENSMUST00000118948 2347 ntBASIC9.38□□□□□ -0.91
Usp48Q3V0C5 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp48Q3V0C5 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp48Q3V0C5 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp48Q3V0C5 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp48Q3V0C5 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Usp48Q3V0C5 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Usp48Q3V0C5 Gm43258-201ENSMUST00000200312 1950 ntBASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms