Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CiitaP79621 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.72□□□□□ -1.17
CiitaP79621 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7.72□□□□□ -1.17
CiitaP79621 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.72□□□□□ -1.17
CiitaP79621 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CiitaP79621 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CiitaP79621 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CiitaP79621 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
CiitaP79621 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
CiitaP79621 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
CiitaP79621 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.71□□□□□ -1.17
CiitaP79621 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CiitaP79621 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CiitaP79621 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CiitaP79621 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CiitaP79621 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
CiitaP79621 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CiitaP79621 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CiitaP79621 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CiitaP79621 Gm42478-201ENSMUST00000199252 1467 ntBASIC7.71□□□□□ -1.18
CiitaP79621 Mir697-201ENSMUST00000102316 109 ntBASIC7.71□□□□□ -1.18
CiitaP79621 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
CiitaP79621 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CiitaP79621 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CiitaP79621 Gm13768-201ENSMUST00000116469 929 ntBASIC7.71□□□□□ -1.18
CiitaP79621 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.71□□□□□ -1.18
CiitaP79621 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC7.71□□□□□ -1.18
CiitaP79621 Gm24286-201ENSMUST00000157632 128 ntBASIC7.71□□□□□ -1.18
CiitaP79621 Mir1929-201ENSMUST00000158635 93 ntBASIC7.71□□□□□ -1.18
CiitaP79621 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC7.71□□□□□ -1.18
CiitaP79621 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CiitaP79621 Ighv5-5-201ENSMUST00000193826 329 ntBASIC7.71□□□□□ -1.18
CiitaP79621 Gm44892-201ENSMUST00000208595 488 ntBASIC7.71□□□□□ -1.18
CiitaP79621 Gm45733-201ENSMUST00000212988 437 ntBASIC7.71□□□□□ -1.18
CiitaP79621 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC7.71□□□□□ -1.18
CiitaP79621 Gm31711-201ENSMUST00000220687 196 ntBASIC7.71□□□□□ -1.18
CiitaP79621 AC124510.2-201ENSMUST00000221958 683 ntBASIC7.71□□□□□ -1.18
CiitaP79621 AC124450.1-201ENSMUST00000225569 495 ntBASIC7.71□□□□□ -1.18
CiitaP79621 AC122459.3-201ENSMUST00000228508 1042 ntBASIC7.71□□□□□ -1.18
CiitaP79621 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.71□□□□□ -1.18
CiitaP79621 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CiitaP79621 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
CiitaP79621 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CiitaP79621 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
CiitaP79621 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.71□□□□□ -1.18
CiitaP79621 Gm43872-201ENSMUST00000203218 2213 ntBASIC7.71□□□□□ -1.18
CiitaP79621 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CiitaP79621 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CiitaP79621 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CiitaP79621 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CiitaP79621 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CiitaP79621 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CiitaP79621 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CiitaP79621 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CiitaP79621 CT025619.3-201ENSMUST00000216299 3267 ntBASIC7.7□□□□□ -1.18
CiitaP79621 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
CiitaP79621 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CiitaP79621 Gm43681-201ENSMUST00000201581 1903 ntBASIC7.7□□□□□ -1.18
CiitaP79621 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC7.7□□□□□ -1.18
CiitaP79621 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.7□□□□□ -1.18
CiitaP79621 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CiitaP79621 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CiitaP79621 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.7□□□□□ -1.18
CiitaP79621 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.7□□□□□ -1.18
CiitaP79621 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CiitaP79621 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CiitaP79621 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CiitaP79621 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
CiitaP79621 Gm24756-201ENSMUST00000177002 96 ntBASIC7.7□□□□□ -1.18
CiitaP79621 Gm43546-201ENSMUST00000196721 943 ntBASIC7.7□□□□□ -1.18
CiitaP79621 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
CiitaP79621 Gm42713-201ENSMUST00000202709 945 ntBASIC7.7□□□□□ -1.18
CiitaP79621 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.7□□□□□ -1.18
CiitaP79621 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC7.7□□□□□ -1.18
CiitaP79621 Gm45136-201ENSMUST00000205793 943 ntBASIC7.7□□□□□ -1.18
CiitaP79621 Gm4585-201ENSMUST00000207218 452 ntBASIC7.7□□□□□ -1.18
CiitaP79621 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC7.7□□□□□ -1.18
CiitaP79621 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC7.7□□□□□ -1.18
CiitaP79621 AC155270.1-202ENSMUST00000221503 352 ntBASIC7.7□□□□□ -1.18
CiitaP79621 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC7.7□□□□□ -1.18
CiitaP79621 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.7□□□□□ -1.18
CiitaP79621 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.7□□□□□ -1.18
CiitaP79621 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CiitaP79621 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CiitaP79621 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CiitaP79621 Gm26645-201ENSMUST00000181076 1316 ntBASIC7.7□□□□□ -1.18
CiitaP79621 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC7.7□□□□□ -1.18
CiitaP79621 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7.7□□□□□ -1.18
CiitaP79621 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CiitaP79621 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CiitaP79621 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CiitaP79621 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CiitaP79621 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
CiitaP79621 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
CiitaP79621 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CiitaP79621 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms