Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC7.6□□□□□ -1.19
Shmt1P50431 Gm43222-201ENSMUST00000199013 603 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.6□□□□□ -1.19
Shmt1P50431 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 AC132104.1-201ENSMUST00000213615 260 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Shmt1P50431 Gm46424-201ENSMUST00000221567 168 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 AC131033.1-201ENSMUST00000228223 279 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Shmt1P50431 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
Shmt1P50431 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Shmt1P50431 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC7.6□□□□□ -1.19
Shmt1P50431 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Shmt1P50431 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC7.6□□□□□ -1.19
Shmt1P50431 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Shmt1P50431 Rian-209ENSMUST00000182406 3476 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Shmt1P50431 Gm37161-201ENSMUST00000191994 2697 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.6□□□□□ -1.19
Shmt1P50431 Gm37924-201ENSMUST00000195470 3647 ntBASIC7.6□□□□□ -1.19
Shmt1P50431 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Shmt1P50431 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Shmt1P50431 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
Shmt1P50431 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Gm11342-203ENSMUST00000224879 1324 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Shmt1P50431 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Shmt1P50431 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm13260-201ENSMUST00000117797 1264 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Gm8662-201ENSMUST00000118644 574 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Gm14612-201ENSMUST00000121522 881 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Gm14251-201ENSMUST00000122133 279 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Gm5392-201ENSMUST00000122189 789 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Gm23657-201ENSMUST00000122623 294 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Gm22024-201ENSMUST00000122733 287 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC7.59□□□□□ -1.19
Shmt1P50431 Mir1930-201ENSMUST00000158799 84 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Shmt1P50431 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm4613-201ENSMUST00000165488 276 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC7.59□□□□□ -1.19
Shmt1P50431 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
Shmt1P50431 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC7.59□□□□□ -1.19
Shmt1P50431 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm37517-201ENSMUST00000194004 1289 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Gm34144-201ENSMUST00000197039 259 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.59□□□□□ -1.19
Shmt1P50431 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC7.59□□□□□ -1.19
Shmt1P50431 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm31711-201ENSMUST00000220687 196 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 AC151902.1-201ENSMUST00000227800 375 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Shmt1P50431 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Shmt1P50431 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Shmt1P50431 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Shmt1P50431 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Shmt1P50431 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 AC124572.1-201ENSMUST00000218155 2406 ntBASIC7.59□□□□□ -1.19
Shmt1P50431 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Shmt1P50431 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC7.58□□□□□ -1.2
Shmt1P50431 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.58□□□□□ -1.2
Shmt1P50431 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms