Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Traf1P39428 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Traf1P39428 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Traf1P39428 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Traf1P39428 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Traf1P39428 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.31□□□□□ -1.08
Traf1P39428 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC8.31□□□□□ -1.08
Traf1P39428 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Traf1P39428 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Traf1P39428 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC8.3□□□□□ -1.08
Traf1P39428 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Traf1P39428 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC8.3□□□□□ -1.08
Traf1P39428 AC156163.1-201ENSMUST00000215598 3369 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 Gm37906-201ENSMUST00000192050 3035 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Traf1P39428 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.3□□□□□ -1.08
Traf1P39428 Gm26419-201ENSMUST00000104272 133 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Gm7746-201ENSMUST00000120966 503 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Gm12518-201ENSMUST00000122075 779 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC8.3□□□□□ -1.08
Traf1P39428 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC8.3□□□□□ -1.08
Traf1P39428 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 Gm25281-201ENSMUST00000157270 104 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Gm16138-201ENSMUST00000159341 821 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Traf1P39428 Gm16297-201ENSMUST00000161466 459 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Gm16026-205ENSMUST00000162923 641 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 Gm25640-201ENSMUST00000175378 125 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Gm20637-201ENSMUST00000175715 462 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Mir6241-201ENSMUST00000184225 103 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC8.3□□□□□ -1.08
Traf1P39428 Gm7285-201ENSMUST00000198801 580 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Gm30646-201ENSMUST00000207662 180 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Gm18469-201ENSMUST00000208850 439 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Gm45432-201ENSMUST00000210391 416 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC8.3□□□□□ -1.08
Traf1P39428 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Traf1P39428 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC8.3□□□□□ -1.08
Traf1P39428 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 Gm9985-201ENSMUST00000044101 510 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Traf1P39428 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Traf1P39428 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Traf1P39428 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Traf1P39428 Gm44769-201ENSMUST00000206120 2809 ntBASIC8.3□□□□□ -1.08
Traf1P39428 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Traf1P39428 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Traf1P39428 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.29□□□□□ -1.08
Traf1P39428 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.29□□□□□ -1.08
Traf1P39428 Gm18508-201ENSMUST00000215790 1642 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Gm43189-201ENSMUST00000196040 3069 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Traf1P39428 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Traf1P39428 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Traf1P39428 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.29□□□□□ -1.08
Traf1P39428 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Traf1P39428 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Traf1P39428 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Traf1P39428 Gm25498-201ENSMUST00000104424 129 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Traf1P39428 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Gm15007-201ENSMUST00000119982 710 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Gm11338-201ENSMUST00000120086 1160 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Gm11689-201ENSMUST00000120766 302 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Gm11257-201ENSMUST00000121313 315 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Gm8577-201ENSMUST00000122420 986 ntBASIC8.29□□□□□ -1.08
Traf1P39428 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Traf1P39428 Mir1930-201ENSMUST00000158799 84 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Mir3078-201ENSMUST00000175231 87 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Gm5283-201ENSMUST00000177874 334 ntBASIC8.29□□□□□ -1.08
Traf1P39428 n-R5s93-201ENSMUST00000180091 119 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC8.29□□□□□ -1.08
Traf1P39428 Gm37295-201ENSMUST00000192186 109 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Gm42883-201ENSMUST00000202594 222 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Traf1P39428 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC8.29□□□□□ -1.08
Traf1P39428 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC8.29□□□□□ -1.08
Traf1P39428 Gm46424-201ENSMUST00000221567 168 ntBASIC8.29□□□□□ -1.08
Traf1P39428 AV026068-219ENSMUST00000224148 933 ntBASIC8.29□□□□□ -1.08
Traf1P39428 AC101205.1-201ENSMUST00000227916 907 ntBASIC8.29□□□□□ -1.08
Traf1P39428 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms