Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm5601-201ENSMUST00000118909 972 ntBASIC12.83□□□□□ -0.35
Ccdc180J3QNE4 Gm43212-201ENSMUST00000198208 394 ntBASIC12.83□□□□□ -0.35
Ccdc180J3QNE4 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc180J3QNE4 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Ccdc180J3QNE4 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Ccdc180J3QNE4 Gm42972-201ENSMUST00000196937 5617 ntBASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Gm11370-201ENSMUST00000120583 260 ntBASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Gm43748-201ENSMUST00000202329 1233 ntBASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 AC154324.1-201ENSMUST00000226711 814 ntBASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Gm15229-201ENSMUST00000146636 1398 ntBASIC12.83□□□□□ -0.36
Ccdc180J3QNE4 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Gm15216-201ENSMUST00000118058 277 ntBASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Gm15000-201ENSMUST00000118275 1243 ntBASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Gm9506-201ENSMUST00000118516 320 ntBASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Gm6004-201ENSMUST00000173237 1116 ntBASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 AC155941.3-201ENSMUST00000218476 308 ntBASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 AC147782.1-201ENSMUST00000219169 475 ntBASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 AC073562.1-201ENSMUST00000222117 401 ntBASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 CT009742.1-201ENSMUST00000222507 702 ntBASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 AC138765.3-201ENSMUST00000227981 423 ntBASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Gm22684-201ENSMUST00000082849 132 ntBASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Gm42898-201ENSMUST00000200370 3073 ntBASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Zbtb34-201ENSMUST00000091037 6510 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc180J3QNE4 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Gm43867-201ENSMUST00000203860 525 ntBASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Gm46379-201ENSMUST00000222551 265 ntBASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Gm6493-201ENSMUST00000159889 1786 ntBASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc180J3QNE4 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gm4556-201ENSMUST00000217808 355 ntBASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gm43221-201ENSMUST00000197612 2071 ntBASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gm44669-201ENSMUST00000207774 1969 ntBASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gm43533-201ENSMUST00000202933 2936 ntBASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 AC122828.2-201ENSMUST00000222511 2880 ntBASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc180J3QNE4 Gm37525-201ENSMUST00000193499 2871 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms