Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm23762-201ENSMUST00000158348 106 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm28070-201ENSMUST00000191502 445 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm8182-201ENSMUST00000197863 769 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm43243-201ENSMUST00000199964 278 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm43906-201ENSMUST00000203194 906 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm5154-201ENSMUST00000203971 399 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm7972-201ENSMUST00000208434 1137 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm45497-201ENSMUST00000211701 740 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm6419-201ENSMUST00000097166 429 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm12919-201ENSMUST00000119855 1594 ntBASIC6.64□□□□□ -1.35
Cdc40Q9DC48 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Cdc40Q9DC48 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm13130-201ENSMUST00000119195 1166 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm11850-201ENSMUST00000119679 479 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm2976-201ENSMUST00000160362 513 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm16027-201ENSMUST00000161618 758 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm22132-201ENSMUST00000175316 100 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm38244-201ENSMUST00000191737 2586 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm37295-201ENSMUST00000192186 109 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm37883-201ENSMUST00000194970 725 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Ighv1-73-201ENSMUST00000197435 352 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm43168-201ENSMUST00000201039 1612 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm45478-201ENSMUST00000209472 211 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm31711-201ENSMUST00000220687 196 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm46379-201ENSMUST00000222551 265 ntBASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Cdc40Q9DC48 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Cdc40Q9DC48 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms