Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm15501-202ENSMUST00000140687 625 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm25721-201ENSMUST00000157496 171 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm24039-201ENSMUST00000157878 132 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm25265-201ENSMUST00000158520 347 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm43542-201ENSMUST00000199505 379 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm43377-201ENSMUST00000201640 455 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm7368-201ENSMUST00000213307 367 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm17950-201ENSMUST00000214617 646 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 AC132384.6-201ENSMUST00000218976 1206 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 AC154528.3-201ENSMUST00000228011 679 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Eqtn-201ENSMUST00000030309 1074 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Sf3a3Q9D554 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Mir669e-201ENSMUST00000117003 119 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm5319-201ENSMUST00000118965 873 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm16248-201ENSMUST00000124238 243 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm10913-201ENSMUST00000133732 463 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm17051-201ENSMUST00000170787 487 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm8357-201ENSMUST00000181115 1011 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm4891-201ENSMUST00000182279 912 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm27218-201ENSMUST00000183745 392 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm8480-201ENSMUST00000190350 698 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm43310-201ENSMUST00000198975 820 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm44285-201ENSMUST00000203557 940 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm44192-201ENSMUST00000204195 556 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 AC134607.1-201ENSMUST00000214707 485 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm19189-201ENSMUST00000221689 754 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.97□□□□□ -1.29
Sf3a3Q9D554 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms